PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00093.1.g00310.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 249aa    MW: 27371.2 Da    PI: 6.1711
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00093.1.g00310.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.67.1e-20132194259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST....T---EEEEEE.-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa....gCpvkkkver.saedpkvveitYegeHnhe 59 
                                   +Dg++WrKYG K++ + +++r YY+C  +    +Cp+kk v++ s+++p ++++t+ +eH+++
  Zmw_sc00093.1.g00310.1.sm.mk 132 NDGFSWRKYGEKKILNDPYTRMYYKCGNSdshsKCPAKKYVQQqSNSEPPLFTVTFINEHTCS 194
                                   7*************************6544455********872567999***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-22118194IPR003657WRKY domain
PROSITE profilePS5081115.847126196IPR003657WRKY domain
SuperFamilySSF1182901.96E-19127194IPR003657WRKY domain
SMARTSM007741.7E-23131195IPR003657WRKY domain
PfamPF031063.8E-21132193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MPKSEGMSPS SSQPPSNWRK AAIQELSRGT ELAARLRQQV ELIPELDRRE AVVANVSEIS  60
EAMEASLSIL QSESEHSSSE ALQAGCAAYS SDGGSEPRHG AAARGRKVKH RRGRLGEEST  120
VIKEIQTDSP DNDGFSWRKY GEKKILNDPY TRMYYKCGNS DSHSKCPAKK YVQQQSNSEP  180
PLFTVTFINE HTCSTAFPDE PSSSSDSSHV IDFTKPSSLS PPLMEGATGP GLKQEEEAMT  240
SVFAHRWAY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808777.12e-80probable WRKY transcription factor 62
TrEMBLA0A2T7ECG81e-79A0A2T7ECG8_9POAL; Uncharacterized protein
STRINGSi022933m8e-76(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944