PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00120.1.g00240.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 534aa MW: 58812.8 Da PI: 10.6349

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00120.1.g00240.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.3	5.4e-48	5	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk 79 +ppGfrFhP+d+elv +yL +k++g+ + v +++vd++k+ePwdLp +++ +e +ewyfFs d+ky+tg+r+nrat+ Zmw_sc00120.1.g00240.1.am.mk 5 MPPGFRFHPRDDELVLDYLLPKLSGHCHARGGVaMADVDVNKCEPWDLPeECCVSEGNEWYFFSLPDRKYTTGERTNRATR 85 79**********************97776777***********667778899******************* PP NAM 80 sgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 sgyWkatgkd++ +k +lvg +ktLvfy+grap+g+kt Wvmhe+r+ Zmw_sc00120.1.g00240.1.am.mk 86 SGYWKATGKDRAADDKtvktPATLVGRRKTLVFYTGRAPNGRKTAWVMHEFRV 138 *****999888744434555*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.09E-52	3	160	IPR003441	NAC domain
PROSITE profile	PS51005	52.905	5	160	IPR003441	NAC domain
Pfam	PF02365	1.1E-24	6	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence Send to blast
METRMPPGFR FHPRDDELVL DYLLPKLSGH CHARGGVAMA DVDVNKCEPW DLPEECCVSE 60 GNEWYFFSLP DRKYTTGERT NRATRSGYWK ATGKDRAADD KTVKTPATLV GRRKTLVFYT 120 GRAPNGRKTA WVMHEFRVEL PSPPRLGREG NWVLCRVLYK SGTTTPRPAS KDQAGMPTSC 180 EPDLPVTAPP VIAAFNAIDG SRTAAEQVSC FSGLPALPFR RPVSRGDGHA MGISEKQAMG 240 IMSKNSSSQG PEKDSSSPAL RSTASRIAVS MHSSGTTLMS TWRHSVGSST TTRRHALQTT 300 SAQNTMSRAS SLRKTSCRAS LGSAAQSLAS GGREDGEGRF LVRRLQEENI AARVLNLGLK 360 ERYKYENNDR CSQNRRVLSP EERRAGEEER SLRQDPTNSM VVRAAGWVGS LEITECIRQQ 420 LRSISNGSFG WMKRPRSPPR PLQRVEAPEL MQEPSSPPLN DGSTRSTRAA AKLPALLRAV 480 PARHKPHRAA PPRCHIRPPT CLAPRAPTQI VNVGHFLVVF NLQLLSLSLS LPSS

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence Send to blast

METRMPPGFR FHPRDDELVL DYLLPKLSGH CHARGGVAMA DVDVNKCEPW DLPEECCVSE  60
GNEWYFFSLP DRKYTTGERT NRATRSGYWK ATGKDRAADD KTVKTPATLV GRRKTLVFYT  120
GRAPNGRKTA WVMHEFRVEL PSPPRLGREG NWVLCRVLYK SGTTTPRPAS KDQAGMPTSC  180
EPDLPVTAPP VIAAFNAIDG SRTAAEQVSC FSGLPALPFR RPVSRGDGHA MGISEKQAMG  240
IMSKNSSSQG PEKDSSSPAL RSTASRIAVS MHSSGTTLMS TWRHSVGSST TTRRHALQTT  300
SAQNTMSRAS SLRKTSCRAS LGSAAQSLAS GGREDGEGRF LVRRLQEENI AARVLNLGLK  360
ERYKYENNDR CSQNRRVLSP EERRAGEEER SLRQDPTNSM VVRAAGWVGS LEITECIRQQ  420
LRSISNGSFG WMKRPRSPPR PLQRVEAPEL MQEPSSPPLN DGSTRSTRAA AKLPALLRAV  480
PARHKPHRAA PPRCHIRPPT CLAPRAPTQI VNVGHFLVVF NLQLLSLSLS LPSS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	1e-37	5	163	20	171	NAC domain-containing protein 19
3swm_B	1e-37	5	163	20	171	NAC domain-containing protein 19
3swm_C	1e-37	5	163	20	171	NAC domain-containing protein 19
3swm_D	1e-37	5	163	20	171	NAC domain-containing protein 19
3swp_A	1e-37	5	163	20	171	NAC domain-containing protein 19
3swp_B	1e-37	5	163	20	171	NAC domain-containing protein 19
3swp_C	1e-37	5	163	20	171	NAC domain-containing protein 19
3swp_D	1e-37	5	163	20	171	NAC domain-containing protein 19

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP69148	2	2