PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00140.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GRAS

Protein Properties

Length: 73aa MW: 8232.69 Da PI: 9.8625

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00140.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	23.3	7.3e-08	2	55	296	349
GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgy 349 ++va g rrerhe++ +W + ++ aGF+ +p+++ + k+ + ++ g Zmw_sc00140.1.g00120.1.sm.mk 2 DIVAGYGVLRRERHEKMTHWLMLMTVAGFELIPMTYGVFKETAIAAHLLSGSGS 55 899999*****************************9999887776666665554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	2.5E-5	2	55	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 73 aa Download sequence Send to blast
MDIVAGYGVL RRERHEKMTH WLMLMTVAGF ELIPMTYGVF KETAIAAHLL SGSGSNMRIV 60 QMFNQGKSAN LQF

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP69233	2	2