PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00173.1.g00160.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 245aa    MW: 26074.3 Da    PI: 7.8818
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00173.1.g00160.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-06183234951
                                   HHHHHHHHHHHHHHHHCTSCC.C...........TTS-STCHHHHHHHHHHH CS
                           HLH   9 ErrRRdriNsafeeLrellPk.as........kapskKlsKaeiLekAveYI 51 
                                    ++RR+r+N+++  L+el+P+ +         +++ +K   ++ +++A + I
  Zmw_sc00173.1.g00160.1.sm.mk 183 QQNRRERVNQRLKALQELVPNgRKvlqtdafwQTHEGKAPEMSQVREALDAI 234
                                   689******************6669999999999999988888888888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.518174237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-5179231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MALARGPTLT LSCDDESVAN TDIVAYECLY HPMATSAFAH AMTGISSLSS PVTFDFEGHG  60
EMYHCATWVV DAAVQPCYGG SVAPPTPSHA AASNFGSFEA SSVTDGILST NKRPRAHPAP  120
PPQHGPHEEE AAAAAKKQSC CKTIGATTTK RTKAPTVPPP RKAQGTAANV LLPAAAVNWI  180
GRQQNRRERV NQRLKALQEL VPNGRKVLQT DAFWQTHEGK APEMSQVREA LDAITLSATS  240
SSQFN