PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00195.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 399aa MW: 43722.8 Da PI: 7.1636

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00195.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.3e-51	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 lp+GfrFhPtdeel+v+yL ++++ ++++ +i+ev+iy+++PwdLp+k+ +e+ewyfFs+rd+ky++g+r+nra+ Zmw_sc00195.1.g00070.1.sm.mkhc 17 LPAGFRFHPTDEELIVHYLMNQAACIPCPV-PIIAEVNIYECNPWDLPRKAVFGENEWYFFSPRDRKYPNGSRPNRAAG 94 799*************************.88***********8777899******************** PP NAM 80 sgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +gyWkatg+dk+v+++ +ge+vg+kk Lvfy gr p+g+ktdW+mheyrl Zmw_sc00195.1.g00070.1.sm.mkhc 95 NGYWKATGTDKAVVAAasTGETVGVKKALVFYMGRPPRGVKTDWIMHEYRL 145 **********98888999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.32E-63	9	176	IPR003441	NAC domain
PROSITE profile	PS51005	57.892	17	176	IPR003441	NAC domain
Pfam	PF02365	1.8E-25	18	145	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence Send to blast
MANSRSSSSS CRTMPSLPAG FRFHPTDEEL IVHYLMNQAA CIPCPVPIIA EVNIYECNPW 60 DLPRKAVFGE NEWYFFSPRD RKYPNGSRPN RAAGNGYWKA TGTDKAVVAA ASTGETVGVK 120 KALVFYMGRP PRGVKTDWIM HEYRLTVGNG KTTRRAAGSS SSMRLDDWVL CRIHKKSNNF 180 QFSDQEQEGS SIVEEADSSL NNTNMNTNGG APSPASEQAS HASDAGDHQF QLPPRLPKSC 240 SLTDLLNSID YSALSQLLLD APAEPEPEPQ PQQQQGQSPL IYYATPACPQ PQLLKSSLNV 300 SQLQVDALFS DYSAGYYSRS SGLKRKRSSC DDGSSSRRKL QLLPSEATFF GSASGYCNQQ 360 LAEAASSSGG GFQYSGLLSH PLLNQQQLLL NSHLEMQMQ

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence Send to blast

MANSRSSSSS CRTMPSLPAG FRFHPTDEEL IVHYLMNQAA CIPCPVPIIA EVNIYECNPW  60
DLPRKAVFGE NEWYFFSPRD RKYPNGSRPN RAAGNGYWKA TGTDKAVVAA ASTGETVGVK  120
KALVFYMGRP PRGVKTDWIM HEYRLTVGNG KTTRRAAGSS SSMRLDDWVL CRIHKKSNNF  180
QFSDQEQEGS SIVEEADSSL NNTNMNTNGG APSPASEQAS HASDAGDHQF QLPPRLPKSC  240
SLTDLLNSID YSALSQLLLD APAEPEPEPQ PQQQQGQSPL IYYATPACPQ PQLLKSSLNV  300
SQLQVDALFS DYSAGYYSRS SGLKRKRSSC DDGSSSRRKL QLLPSEATFF GSASGYCNQQ  360
LAEAASSSGG GFQYSGLLSH PLLNQQQLLL NSHLEMQMQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-73	16	181	14	173	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828039.1	1e-146	NAC transcription factor 29-like
TrEMBL	A0A2T7CJJ9	1e-145	A0A2T7CJJ9_9POAL; Uncharacterized protein
STRING	Si026530m	1e-140	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3803	37	75