PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00195.1.g00380.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 86aa MW: 9779.78 Da PI: 8.7106

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00195.1.g00380.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	27.9	4.7e-09	40	60	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYG K+ +s+fpr Zmw_sc00195.1.g00380.1.sm.mkhc 40 DDGHQWRKYGEKKLSNSNFPR 60 8*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.6E-8	28	61	IPR003657	WRKY domain
SuperFamily	SSF118290	7.72E-9	32	64	IPR003657	WRKY domain
SMART	SM00774	8.4E-5	39	81	IPR003657	WRKY domain
Pfam	PF03106	8.0E-7	40	61	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MALDSVPLYP GGDLGSGSRA TSRAHHQRIS WTADTYAPYD DGHQWRKYGE KKLSNSNFPR 60 FCPSQMHIQE RNEVCRYKAS PAEGHQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020172253.1	5e-25	WRKY transcription factor 55-like
TrEMBL	A0A3B6IP02	1e-23	A0A3B6IP02_WHEAT; Uncharacterized protein
TrEMBL	A0A446R2R1	1e-23	A0A446R2R1_TRITD; Uncharacterized protein
TrEMBL	A0A446RY79	1e-23	A0A446RY79_TRITD; Uncharacterized protein
TrEMBL	A0A453HPE7	1e-23	A0A453HPE7_AEGTS; Uncharacterized protein
TrEMBL	M8CYI1	1e-23	M8CYI1_AEGTA; WRKY transcription factor 55
TrEMBL	W5DRW6	1e-23	W5DRW6_WHEAT; Uncharacterized protein
STRING	EMT28936	2e-24	(Aegilops tauschii)
STRING	MLOC_34522.1	2e-24	(Hordeum vulgare)
STRING	Traes_4AL_9E0D1CFA6.1	2e-24	(Triticum aestivum)
STRING	Traes_4BS_A6D9EB0E5.1	5e-24	(Triticum aestivum)
STRING	Traes_4DS_FE38A59D0.1	2e-24	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2032	35	100