PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00195.1.g00400.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 225aa    MW: 25045 Da    PI: 6.6194
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00195.1.g00400.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.62.8e-0920651959
                                  SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY 19 efprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59
                                  +f  sY+rCt++   gC ++k v++++  +d+ +++++Y+++H+++
  Zmw_sc00195.1.g00400.1.am.mk 20 PFKGSYFRCTYKddtGCLATKYVQQKNdrSDTPMFQVIYNNDHTCN 65
                                  56679******99999*******9876226999***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007742.3E-71466IPR003657WRKY domain
SuperFamilySSF1182905.62E-91865IPR003657WRKY domain
PfamPF031063.8E-111864IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-81965IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MIDRRLRVEE IWREEDQRHP FKGSYFRCTY KDDTGCLATK YVQQKNDRSD TPMFQVIYNN  60
DHTCNCIAAS SSSAKKNIST LPIPGGAAGH RDFVVTEQEA TAVALPPLAD VSSVDVALDE  120
QIQEPFAITD HCDFTIGAAG EIWANRLRTV RSGQHVQHVP FWTMASSSSP PPPGFKRLIK  180
QSCKLLAAED HSQTQQAGVR VYTREDAGKR MQQTASSGTG EWTVE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2782934