PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00214.1.g00370.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 255aa MW: 27500.7 Da PI: 9.0563

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00214.1.g00370.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.5	4e-30	18	71	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+eLH++Fv+ave LGG+++AtPk+il+lm+vkg+ ++h+kSHLQ+YR+ Zmw_sc00214.1.g00370.1.sm.mkhc 18 PRMRWTEELHRQFVKAVECLGGPDEATPKRILQLMGVKGVGISHIKSHLQMYRS 71 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.7E-29	14	72	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.489	14	74	IPR017930	Myb domain
SuperFamily	SSF46689	2.33E-15	18	73	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.7E-24	18	71	IPR006447	Myb domain, plants
Pfam	PF00249	1.9E-7	19	70	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MRGFERKGVR QYNRSEVPRM RWTEELHRQF VKAVECLGGP DEATPKRILQ LMGVKGVGIS 60 HIKSHLQMYR SSSNNSTHQA SHQKSISATA SNSKRVFWSR EDHCVYASDH DGNAASSDKN 120 ICAILLRNCS QSPQYQTPSL KQVFGNWEQS RGGRPPWHSS SMLTPGKAIR PSNGSSKKPA 180 EKQNGCDLTL SIGPCEDASS DADGSSTISE EVAARQGGES LGSPAAGGGL VAVKPESAPP 240 PALNLDLTIS SSWLA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	6e-16	19	72	3	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-16	19	72	3	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-16	19	72	3	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-16	19	72	3	56	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025810426.1	1e-110	probable transcription factor KAN3
TrEMBL	A0A2S3HH64	1e-109	A0A2S3HH64_9POAL; Uncharacterized protein
STRING	Si007179m	1e-103	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5493	37	58