PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00217.1.g00370.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 298aa MW: 30863.4 Da PI: 8.4901

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00217.1.g00370.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	96.9	1.4e-30	87	132	17	62
zf-Dof 17 kfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 fCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+n k+ Zmw_sc00217.1.g00370.1.am.mk 87 GFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRA 132 6****************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	22.834	76	130	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.9E-24	87	130	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	7.0E-19	88	130	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MAFSLPILLE PPSWGQMQMQ QQRSLQCLLG GGGRGSDHHH LMPSPAGLAP LPDGPPDTAA 60 SAPAGGVSST SLQKQATAET AQLSRQGFCY FNNYSLSQPR HFCKACRRYW TRGGALRNVP 120 VGGGCRRNTK RASKKASRQG AAGGPTAASS SSSTATTSTT VTTTTKSSAA AAEVLASMHA 180 QLPHLGLSPA AAAAALEASL EGYHHYLPLQ MQQQFLQQGL DGYHFTDGDG GGVFADGLPR 240 GVASGLLAQL AAVKMEEHNN GGAVAAAHEQ SYWPGSGGNE WPTEFLSGFS LSSSGNVL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002442354.2	1e-102	dof zinc finger protein DOF2.4
TrEMBL	A0A317Y8M1	1e-110	A0A317Y8M1_MAIZE; Dof zinc finger protein DOF5.1
TrEMBL	B6U2U9	1e-110	B6U2U9_MAIZE; Uncharacterized protein
STRING	Pavir.Ca02598.1.p	1e-100	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367