PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00303.1.g00190.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 237aa    MW: 25946.9 Da    PI: 5.4054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00303.1.g00190.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.8e-1676125355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  Zmw_sc00303.1.g00190.1.sm.mk  76 FIGVRTRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 125
                                   67***999.**********32..2.24***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.15375133IPR001471AP2/ERF domain
SMARTSM003801.2E-3175139IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2176135IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-2876134IPR001471AP2/ERF domain
CDDcd000181.11E-1676134No hitNo description
PRINTSPR003674.2E-87687IPR001471AP2/ERF domain
PfamPF008476.8E-1277125IPR001471AP2/ERF domain
PRINTSPR003674.2E-899115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MATTDGDDQF RRQLDALINF LDSEDSSDSF SFHSYANSSE AAMELESIGH ETHDMVQPCE  60
EASSTIENKT KPPQPFIGVR TRPWGKFAAE IRDSTRKGAR VWLGTFDTPE AAALAYDQAA  120
FSARGASAVL NFPVECVQES LRPLALSDAT GGSPVLALKR RHSKRTRRSK LSPNSINVLK  180
PQRRRPRQCS GGKGNSTAVV VAQQLETPAC PFGAVELDDL GADYLDELLR LSSELEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-24761351574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022685222.13e-57LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF094-like
TrEMBLA0A2T7CMG42e-59A0A2T7CMG4_9POAL; Uncharacterized protein
STRINGTraes_4AS_9450AD3F4.16e-49(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249