PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00321.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

C2H2

Protein Properties

Length: 166aa MW: 17952.5 Da PI: 10.2278

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00321.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.2e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp Cg++F++ + L H+ +H Zmw_sc00321.1.g00120.1.am.mk 74 HKCPVCGEVFPSGMALGGHMGKH 96 79**************9999888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	0.052	44	61	IPR007087	Zinc finger, C2H2
Pfam	PF13912	1.9E-9	74	98	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	76	96	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MKWIWMRHPS GSTSSWLRRL NCQACHEDSP SKNGAEGTRD GSNICGRSSP TPQALGGHNY 60 RQWKAAEPAD RREHKCPVCG EVFPSGMALG GHMGKHRERL QTAGKRSKKQ RAEPPAAPVA 120 PPAPLASPAA GTMADEGIQT VLLPEVKGIR LFGVYMIPHV PSHPPP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP69840	2	2