PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00326.1.g00460.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 991aa MW: 107641 Da PI: 7.3318

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00326.1.g00460.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.2	2e-50	492	620	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPt+eel+++yLkkkv++++++l +vi++vd++k+ePwd+++ + + +++wy Fs++dkky+tg+r+nrat Zmw_sc00326.1.g00460.1.am.mk 492 VPPGFRFHPTEEELLTYYLKKKVASERMDL-DVIRDVDLNKLEPWDIQEkcGIGSgPQNDWYLFSHKDKKYPTGTRTNRAT 571 69**************************.9***********952433332556****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+Wkatg+dk+++s ++ +g++ktLvfykgrap+g+k+dW+mheyrl Zmw_sc00326.1.g00460.1.am.mk 572 AAGFWKATGRDKAIYS-CTRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 620 ************.9999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-52	490	625	IPR003441	NAC domain
PROSITE profile	PS51005	50.024	492	660	IPR003441	NAC domain
Pfam	PF02365	4.0E-26	493	620	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 991 aa Download sequence Send to blast
MAVSPSSTAA AAALGVVALL LAAAAVPPAA AEIRETVIRG DPRSIIPLDE FGFTHSGVLE 60 LNTITSTSYR YLWTSVVAGE LATLAFYVFT GYRFRPKVHY PYFVINDEEE EAAAEALNLA 120 MAGLHATSFT NGVGDGSRSD SQMVLVDRHL LPQACLNGDV DETTQRSAEC WTPSLRRGGE 180 VSRGTTEFAC GAAVGKPGLT RKRHYGVLLI RNELTNQPVE REVRSSSYTS RSVIFFQCVV 240 AVVATSSSTR SPIVPWHAAV ITLQQEGELN LDGDKAHVRS PSSSLLLHAL LSESTIQHEG 300 TPIDPEEVPD LVSTCQPGAR ASWLQRATTK TCESENYRIG RDLCRQQRPR ILAYGILERA 360 RRERKNQLEK NTSISLSVAV ADAVTVVAVV AGRGGYAGHP RHHDMPPQHH STDDFSPRPG 420 VAPMRFRLAV LFPEIFKFVC HGSGCYMALF CVPRLLPLVV NLPLPPSLSS SHFFLPGLAR 480 LAGTNPRLKS VVPPGFRFHP TEEELLTYYL KKKVASERMD LDVIRDVDLN KLEPWDIQEK 540 CGIGSGPQND WYLFSHKDKK YPTGTRTNRA TAAGFWKATG RDKAIYSCTR RIGMRKTLVF 600 YKGRAPHGQK SDWIMHEYRL DDADHPTAAA AGDPHYPSPP LASSRTPPSQ QHATVHVMVD 660 DDEVEISLSW VWGLSASSIT RSADERRRGG CVGVNRATES AHPQDHQTCV PQAADEPTKH 720 RPAPAAGSHS AHRQALVVDF CERRRLHQQR DKNGTPPIRG GAAAGEQEAQ EEGWAICRMF 780 KKKNLVLHHG QSNGSGATVA ATVVSKMASV PSAMESSPTS NGSSSVTVRD HVKAAQMLHS 840 GSNVDALDHI LQYMGRSFGD DNNQDTKPPA ALQMDHHHLA AACPSSSFYG KFMKLPPLEH 900 DGSVLLPNPA ATDASGIADW DSLDRLAAYE LNGISDASKN MVSFFDEPSA AATTGAFTSA 960 YTSAGAGDGD LWSLARSSVS SLHADLTMNN V

Sequence ? help Back to Top

Protein Sequence Length: 991 aa Download sequence Send to blast

MAVSPSSTAA AAALGVVALL LAAAAVPPAA AEIRETVIRG DPRSIIPLDE FGFTHSGVLE  60
LNTITSTSYR YLWTSVVAGE LATLAFYVFT GYRFRPKVHY PYFVINDEEE EAAAEALNLA  120
MAGLHATSFT NGVGDGSRSD SQMVLVDRHL LPQACLNGDV DETTQRSAEC WTPSLRRGGE  180
VSRGTTEFAC GAAVGKPGLT RKRHYGVLLI RNELTNQPVE REVRSSSYTS RSVIFFQCVV  240
AVVATSSSTR SPIVPWHAAV ITLQQEGELN LDGDKAHVRS PSSSLLLHAL LSESTIQHEG  300
TPIDPEEVPD LVSTCQPGAR ASWLQRATTK TCESENYRIG RDLCRQQRPR ILAYGILERA  360
RRERKNQLEK NTSISLSVAV ADAVTVVAVV AGRGGYAGHP RHHDMPPQHH STDDFSPRPG  420
VAPMRFRLAV LFPEIFKFVC HGSGCYMALF CVPRLLPLVV NLPLPPSLSS SHFFLPGLAR  480
LAGTNPRLKS VVPPGFRFHP TEEELLTYYL KKKVASERMD LDVIRDVDLN KLEPWDIQEK  540
CGIGSGPQND WYLFSHKDKK YPTGTRTNRA TAAGFWKATG RDKAIYSCTR RIGMRKTLVF  600
YKGRAPHGQK SDWIMHEYRL DDADHPTAAA AGDPHYPSPP LASSRTPPSQ QHATVHVMVD  660
DDEVEISLSW VWGLSASSIT RSADERRRGG CVGVNRATES AHPQDHQTCV PQAADEPTKH  720
RPAPAAGSHS AHRQALVVDF CERRRLHQQR DKNGTPPIRG GAAAGEQEAQ EEGWAICRMF  780
KKKNLVLHHG QSNGSGATVA ATVVSKMASV PSAMESSPTS NGSSSVTVRD HVKAAQMLHS  840
GSNVDALDHI LQYMGRSFGD DNNQDTKPPA ALQMDHHHLA AACPSSSFYG KFMKLPPLEH  900
DGSVLLPNPA ATDASGIADW DSLDRLAAYE LNGISDASKN MVSFFDEPSA AATTGAFTSA  960
YTSAGAGDGD LWSLARSSVS SLHADLTMNN V

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	4e-43	492	620	15	140	Stress-induced transcription factor NAC1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1D6NW32	1e-120	A0A1D6NW32_MAIZE; NAC domain-containing protein 43

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP36242	3	4