PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00330.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 273aa MW: 30178.3 Da PI: 9.6042

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00330.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2e-35	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 l+pG++F+Ptd++lvv+yL+ ++ + +l+ +i++ di++++P+dL +++ +e +fF +r ++++++r +r++k+g Zmw_sc00330.1.g00110.1.sm.mk 15 LAPGYKFNPTDQDLVVRYLRCRAVNYQLSS-AIIADKDILDHHPSDLV---SETGSEKFFFYRRVLRSENDTRWKRTAKHG 91 579**********************999.78**********6...44567999****************** PP NAM 82 yWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 yW+a+gk+ +++++ + vg+k+tLvfy+g+ p+ge+tdWvm ey l Zmw_sc00330.1.g00110.1.sm.mk 92 YWRASGKEVPIFCTsvS--SgvplmVGIKRTLVFYHGKPPSGERTDWVMREYCL 143 *********7441..356788*************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-36	12	153	IPR003441	NAC domain
PROSITE profile	PS51005	37.133	15	211	IPR003441	NAC domain
Pfam	PF02365	2.5E-18	17	143	IPR003441	NAC domain
SuperFamily	SSF101941	1.44E-36	199	211	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MAASIPLASG ATIPLAPGYK FNPTDQDLVV RYLRCRAVNY QLSSAIIADK DILDHHPSDL 60 VSETGSEKFF FYRRVLRSEN DTRWKRTAKH GYWRASGKEV PIFCTSVSSG VPLMVGIKRT 120 LVFYHGKPPS GERTDWVMRE YCLAGGGLSP YRMMRPCMKN NSGHINGTVK VTSKEHYGPS 180 VTPHITAPSI ENVNIMVNPD SSWVICRIHK KKARKPTIII RANNNAGVEK IRFYDFLGQG 240 NHDDGTASSS ATPMENSEVK GGSSENASTE DGI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-22	13	213	15	167	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-22	13	213	15	167	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-22	13	213	15	167	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-22	13	213	15	167	NO APICAL MERISTEM PROTEIN
3swm_A	4e-22	13	213	18	170	NAC domain-containing protein 19
3swm_B	4e-22	13	213	18	170	NAC domain-containing protein 19
3swm_C	4e-22	13	213	18	170	NAC domain-containing protein 19
3swm_D	4e-22	13	213	18	170	NAC domain-containing protein 19
3swp_A	4e-22	13	213	18	170	NAC domain-containing protein 19
3swp_B	4e-22	13	213	18	170	NAC domain-containing protein 19
3swp_C	4e-22	13	213	18	170	NAC domain-containing protein 19
3swp_D	4e-22	13	213	18	170	NAC domain-containing protein 19
4dul_A	4e-22	13	213	15	167	NAC domain-containing protein 19
4dul_B	4e-22	13	213	15	167	NAC domain-containing protein 19

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4482	23	69