PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00338.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 1024aa MW: 112810 Da PI: 9.6472

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00338.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.9	2.9e-51	237	366	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPtdeel+ +yLkkk+ +k++l evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat Zmw_sc00338.1.g00010.1.am.mk 237 VPPGFRFHPTDEELLLYYLKKKIGFEKFDL-EVIREVDLNKIEPWELQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRAT 316 69**************************.99**********963433332566****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++g+Wkatg+dk + + + +++g++ktLvfy+grap+g+ktdW+mhe+rle Zmw_sc00338.1.g00010.1.am.mk 317 TAGFWKATGRDKCIRT-SYRKIGMRKTLVFYRGRAPHGQKTDWIMHEFRLE 366 ***********9.8999*************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.1E-59	228	388	IPR003441	NAC domain
PROSITE profile	PS51005	57.334	237	388	IPR003441	NAC domain
Pfam	PF02365	5.3E-26	238	365	IPR003441	NAC domain
Gene3D	G3DSA:3.20.20.70	2.2E-139	657	1018	IPR013785	Aldolase-type TIM barrel
SuperFamily	SSF51395	1.34E-121	659	1017	No hit	No description
CDD	cd02933	6.75E-175	660	999	No hit	No description
Pfam	PF00724	2.0E-83	661	995	IPR001155	NADH:flavin oxidoreductase/NADH oxidase, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0055114	Biological Process	oxidation-reduction process
GO:0003677	Molecular Function	DNA binding
GO:0010181	Molecular Function	FMN binding
GO:0016491	Molecular Function	oxidoreductase activity

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence Send to blast
MHAWVFEMQP ADGEFKNRAW SLPEAQAFMA TTFHLAREEA CYQDRAASKW HRKQAQSGRH 60 RSHSKRPRVV ALELESPAMT GRARFLARID RVLRMQPSER ARPAPARGPA VPARPHRDPR 120 LPRGRRARAR VRVTAEQWMS LKVHAPWVWT TTDPRGIWQL TELPARARMA VPCVLRDHLL 180 SPSTAAAAGV NSSRPRPPPP PRSCGPRSPA SKLLKAEGSS SRGKGVVMAV FSSSNGVPPG 240 FRFHPTDEEL LLYYLKKKIG FEKFDLEVIR EVDLNKIEPW ELQERCRIGS APQNEWYFFS 300 HKDRKYPTGS RTNRATTAGF WKATGRDKCI RTSYRKIGMR KTLVFYRGRA PHGQKTDWIM 360 HEFRLEEADD AQGGTSEDGW VVCRVFKKKC FFKIGGGGEG SASQGADAGG HLAASPPLGG 420 HQSVLASHYI HPHHQYYHAA SSYYSQMQVP AAYSHHVQVQ DLLTNHRPTA DAAGYDFSGL 480 PVEHSAAAGG LDVGSSDGVA ADGAQMEGRD QASGAAEQQW QAIDGFGNGA GNGAVQQMTG 540 AMSSGQRGGE MDLWGYGRAA SRVGSPKPAT RVRNQEATGN NPGDLWLWRC VVAERGQLGR 600 LGSWLPRPKL HGCTFLRRRE VERPCSVHAV SVVGRSPKPR SRMGDDRHAV AGGEQTKTIP 660 LLTPYKMGRF QLSHRVVLAP LTRQRSFGCV PQPHAAVYYA QRATQGGFLI AEATGVSHAA 720 QGYPDTPGLW TREQVEAWKP VVDAVHAKGG VFFCQIWHTG RASNYEFQPN GQAPVSSTDR 780 QVAHKESADG LSVTSYAVPR RLRTDEIPAI VDDFRIAARN AIEAGFDGVE VHAAHGYLID 840 QFLKDGVNDR TDEYGGSLAN RCRFALEVVA AVAAEIGADR VGVRVSPYTD YMDATDSDPD 900 ALGAHVARAL GELGVLYLHA VEPRMLRPTE RGETRHSLRP MRDAFGGTFI VAGAYAREDG 960 CRAVADGYAD LVAYGRLFLA NPDLPRRFAL DAPLNKYDRE TFYTPDPVIG YTDYPFLGDD 1020 DLSK

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence Send to blast

MHAWVFEMQP ADGEFKNRAW SLPEAQAFMA TTFHLAREEA CYQDRAASKW HRKQAQSGRH  60
RSHSKRPRVV ALELESPAMT GRARFLARID RVLRMQPSER ARPAPARGPA VPARPHRDPR  120
LPRGRRARAR VRVTAEQWMS LKVHAPWVWT TTDPRGIWQL TELPARARMA VPCVLRDHLL  180
SPSTAAAAGV NSSRPRPPPP PRSCGPRSPA SKLLKAEGSS SRGKGVVMAV FSSSNGVPPG  240
FRFHPTDEEL LLYYLKKKIG FEKFDLEVIR EVDLNKIEPW ELQERCRIGS APQNEWYFFS  300
HKDRKYPTGS RTNRATTAGF WKATGRDKCI RTSYRKIGMR KTLVFYRGRA PHGQKTDWIM  360
HEFRLEEADD AQGGTSEDGW VVCRVFKKKC FFKIGGGGEG SASQGADAGG HLAASPPLGG  420
HQSVLASHYI HPHHQYYHAA SSYYSQMQVP AAYSHHVQVQ DLLTNHRPTA DAAGYDFSGL  480
PVEHSAAAGG LDVGSSDGVA ADGAQMEGRD QASGAAEQQW QAIDGFGNGA GNGAVQQMTG  540
AMSSGQRGGE MDLWGYGRAA SRVGSPKPAT RVRNQEATGN NPGDLWLWRC VVAERGQLGR  600
LGSWLPRPKL HGCTFLRRRE VERPCSVHAV SVVGRSPKPR SRMGDDRHAV AGGEQTKTIP  660
LLTPYKMGRF QLSHRVVLAP LTRQRSFGCV PQPHAAVYYA QRATQGGFLI AEATGVSHAA  720
QGYPDTPGLW TREQVEAWKP VVDAVHAKGG VFFCQIWHTG RASNYEFQPN GQAPVSSTDR  780
QVAHKESADG LSVTSYAVPR RLRTDEIPAI VDDFRIAARN AIEAGFDGVE VHAAHGYLID  840
QFLKDGVNDR TDEYGGSLAN RCRFALEVVA AVAAEIGADR VGVRVSPYTD YMDATDSDPD  900
ALGAHVARAL GELGVLYLHA VEPRMLRPTE RGETRHSLRP MRDAFGGTFI VAGAYAREDG  960
CRAVADGYAD LVAYGRLFLA NPDLPRRFAL DAPLNKYDRE TFYTPDPVIG YTDYPFLGDD  1020
DLSK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1vji_A	0.0	650	1017	1	368	12-oxophytodienoate reductase (OPR1)
2q3r_A	0.0	650	1017	1	368	12-oxophytodienoate reductase 1
Search in ModeBase

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	58	67	RHRSHSKRPR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0D9ZL91	0.0	A0A0D9ZL91_9ORYZ; Uncharacterized protein
STRING	OGLUM04G13590.1	0.0	(Oryza glumipatula)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9297	30	46