PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00351.1.g00250.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 206aa    MW: 22358.4 Da    PI: 10.8423
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00351.1.g00250.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247e-081341731554
                                   HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   +iN+ +++L++llP+a + ++   s    L++++ YIksL
  Zmw_sc00351.1.g00250.1.am.mk 134 EINELISRLQTLLPSARRRGGNQASTTKLLKETCSYIKSL 173
                                   7**************86667777****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.134119173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-8133190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-9133195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-5134173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MADKTREIGD PAPGKGDRSI LWGSGTRQVE GEVGTQPQLI TRPRTAGARG HPRLRAGEGH  60
LDPTDPNFIC RSVQAAAAPC VSVLAAPPCR VSRAPAAASQ LHRCSISWRL LRRASPTTTT  120
MSSRRSRGGV SEEEINELIS RLQTLLPSAR RRGGNQASTT KLLKETCSYI KSLHREVDDL  180
SDRLSDLMAT MDQNSPGAEI IRSLLR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92838145