PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00369.1.g00210.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 230aa MW: 24319.8 Da PI: 10.6761

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00369.1.g00210.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.1	3.4e-37	102	155	4	57
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57 + l+cprC+st+tkfCyynnysl qPr+fCk+CrryWt+GGalrnvPvGgg+r+ Zmw_sc00369.1.g00210.1.sm.mk 102 AGLPCPRCESTDTKFCYYNNYSLGQPRHFCKGCRRYWTRGGALRNVPVGGGTRR 155 6789*************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.7E-31	104	155	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.565	104	158	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-17	106	146	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	106	142	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MPASKRPKPD TSNEMHGVGN QIVVSSGGTR YNYKRPFQPR SQFLQLRTGQ RQEEQQLELA 60 MVRRSAAGAT EAGHQVTEGN ALALVAAAAA GGGGGGGPKE PAGLPCPRCE STDTKFCYYN 120 NYSLGQPRHF CKGCRRYWTR GGALRNVPVG GGTRRGVPAA RRKRATSFTS LLAPAAPDVR 180 FSAGFLVGGL PPVMMPPPPA SSAPALLPPP VSQALPEGLI WGMGWPDLSI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001307837.1	1e-44	uncharacterized protein LOC107325937
TrEMBL	A0A060D5B9	3e-43	A0A060D5B9_MAIZE; C2C2-DOF transcription factor (Fragment)
TrEMBL	A0A3L6FH85	3e-43	A0A3L6FH85_MAIZE; Dof zinc finger protein DOF2.2
STRING	GRMZM2G378490_P01	4e-44	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367