PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00382.1.g00260.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 702aa MW: 73491.8 Da PI: 10.6356

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00382.1.g00260.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	406	466	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s Zmw_sc00382.1.g00260.1.am.mk 406 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPS 466 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-30	404	464	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.6E-33	408	464	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.059	410	464	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	412	448	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence Send to blast
MQLACLGPKG GRAGRGESSP YLRRSTSGLF RSGDSGFHLV RAVHVWLPRR VHVGPIGAAR 60 PAGHFLCSVR VALPTAVAPF RSGARRSRRT FSIALFYCIH AWCTVATDVK GRVGWQSELL 120 PSIPCLLSAC ARATYWHREL SLSTTLNHGA AADATQERRP TKLLVLRNRR KRRNRHDRKI 180 HGPGYSLAIH WSGRDGGRWV GGWASGGRVR GVGRARGVPS IVGAGMRAGA RSPIELACEC 240 DRFGRGATGN VAPRVWWRCG RRCATTYATA RRRSPWLCSL AIDACVSCVE NVACVRNIIG 300 QIQEQLHGST PLVFHLPSLH LSSQLNSTSY TQRSKNCGCS KGLGLVKPME DMLMATNAAA 360 ANPSQGSAAN PPAPAPSSTP GSALRGGAPA AVAGAGSAER RVRPQKEKAL NCPRCNSTNT 420 KFCYYNNYSL QQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRPSSSSA SDSTSASVTS 480 SSMASSAGVA SKNPKLTQDG AQDLNLAFPH HGGLKAPVDF AAFPSLESSS VGGATTSNGR 540 GGSSGSAVGA ISAMELLRST GYYMPLQVPM QMPGDYAAAG FSFGEFRAPP PPPPPSQNVF 600 GFSLDAHGSA AGAAAAGYGS GTGLPGAPEN ASRLLFPFED LKPPVSSGGG DGAGGASVGT 660 GDENSGHHQF EHGKEQGGGG PGAGHDTPGF WNSMIGGSGT SW

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence Send to blast

MQLACLGPKG GRAGRGESSP YLRRSTSGLF RSGDSGFHLV RAVHVWLPRR VHVGPIGAAR  60
PAGHFLCSVR VALPTAVAPF RSGARRSRRT FSIALFYCIH AWCTVATDVK GRVGWQSELL  120
PSIPCLLSAC ARATYWHREL SLSTTLNHGA AADATQERRP TKLLVLRNRR KRRNRHDRKI  180
HGPGYSLAIH WSGRDGGRWV GGWASGGRVR GVGRARGVPS IVGAGMRAGA RSPIELACEC  240
DRFGRGATGN VAPRVWWRCG RRCATTYATA RRRSPWLCSL AIDACVSCVE NVACVRNIIG  300
QIQEQLHGST PLVFHLPSLH LSSQLNSTSY TQRSKNCGCS KGLGLVKPME DMLMATNAAA  360
ANPSQGSAAN PPAPAPSSTP GSALRGGAPA AVAGAGSAER RVRPQKEKAL NCPRCNSTNT  420
KFCYYNNYSL QQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRPSSSSA SDSTSASVTS  480
SSMASSAGVA SKNPKLTQDG AQDLNLAFPH HGGLKAPVDF AAFPSLESSS VGGATTSNGR  540
GGSSGSAVGA ISAMELLRST GYYMPLQVPM QMPGDYAAAG FSFGEFRAPP PPPPPSQNVF  600
GFSLDAHGSA AGAAAAGYGS GTGLPGAPEN ASRLLFPFED LKPPVSSGGG DGAGGASVGT  660
GDENSGHHQF EHGKEQGGGG PGAGHDTPGF WNSMIGGSGT SW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250\|UniProtKB:Q6K537}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020403354.1	1e-133	dof zinc finger protein isoform X1
Swissprot	Q9SXG8	1e-116	DOF1_ORYSJ; Dof zinc finger protein 1
TrEMBL	A0A0A9GUS7	1e-149	A0A0A9GUS7_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2369	34	86

Publications ? help Back to Top
Washio K Identification of Dof proteins with implication in the gibberellin-regulated expression of a peptidase gene following the germination of rice grains. Biochim. Biophys. Acta, 2001. 1520(1): p. 54-62 [PMID:11470159]