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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zmw_sc00413.1.g00160.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
SRS |
| Protein Properties |
Length: 329aa MW: 33920.2 Da PI: 8.0553 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc00413.1.g00160.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 221.4 | 1.8e-68 | 98 | 264 | 2 | 154 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskr 74
+sg+++CqdCGnqakkdC+h+RCRtCCksrgfdC+th+kstWvpaa+rrerqq + s++++ +a +++sk+
Zmw_sc00413.1.g00160.1.sm.mkhc 98 GSGATTCQDCGNQAKKDCSHNRCRTCCKSRGFDCSTHIKSTWVPAARRRERQQLGGSGSASSSPAAastaaaVASTSKK 176
57889**********************************************9987654433322222344333344444 PP
DUF702 75 krelkskkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvf 143
+r ++q+++s+t++s+a+++++++t+s lP++v+++avf+cvrv+s+ddge+e+aYq+ v+i+Ghvf
Zmw_sc00413.1.g00160.1.sm.mkhc 177 PR--LLSSQTTTSHTSTSNATTPRSFDTTSshqdasfrdsLPRQVRAPAVFKCVRVTSIDDGEDEYAYQAMVTINGHVF 253
44..56999999***************99999*********************************************** PP
DUF702 144 kGiLydqGlee 154
kG+LydqG+++
Zmw_sc00413.1.g00160.1.sm.mkhc 254 KGFLYDQGVDD 264
********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MVVVAPAASF LHTHHHHHHH DAAAAAAAAD PIFPLLSGGP SVLDPETARS GAPSSSAIQF 60
WQSPPPVGAN PNPSASSPFA YLKKPLPMLD TGGGGSSGSG ATTCQDCGNQ AKKDCSHNRC 120
RTCCKSRGFD CSTHIKSTWV PAARRRERQQ LGGSGSASSS PAAASTAAAV ASTSKKPRLL 180
SSQTTTSHTS TSNATTPRSF DTTSSHQDAS FRDSLPRQVR APAVFKCVRV TSIDDGEDEY 240
AYQAMVTING HVFKGFLYDQ GVDDGRHGST SNDDSTAGVP NMSELHLGGG PGSSNAREGG 300
SSMLPTELYG GAGGGQNMMG GSGYGNTMR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influence vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Modulates root growth. {ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18835563}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression repressed by LDL1 via histone H3 and H4 deacetylation. {ECO:0000269|PubMed:18835563}. |
