PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00430.1.g00400.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 1093aa MW: 116952 Da PI: 10.4315

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00430.1.g00400.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.8	3.4e-14	780	861	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessst 78 W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s qCk++++ l+k+yk +++ +++ + Zmw_sc00430.1.g00400.1.am.mk 780 WSDGATSALIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYTKppkSDAQCKNRIDTLKKKYKVERAKRNS-------S 853 ***********************************87889977333667**********99998886.......5 PP trihelix 79 cpyfdqle 86 +p+fd+l+ Zmw_sc00430.1.g00400.1.am.mk 854 WPFFDRLD 861 ****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.200.20	1.8E-17	171	262	No hit	No description
SuperFamily	SSF56112	6.88E-14	174	265	IPR011009	Protein kinase-like domain
Pfam	PF07714	1.2E-6	191	264	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
PROSITE pattern	PS00107	0	192	215	IPR017441	Protein kinase, ATP binding site
Pfam	PF13837	7.0E-23	778	863	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence Send to blast
MRRARLLVRR CRAWWIRSRP FPAISLISSH LLSLSLSLSP SPIAGRNHRG RRCCSPPPSE 60 RELFWGRSRG RHDLLTAPRT NPRIIVVNSI VRSGDEGDGG GAEEDSYGPP ASQAAPPPNV 120 NAPGPTLSID QQFQFLLDRE TTNLTSRNRG GPRGPGAPRP GGPAKPVNID VPAIPFDELK 180 KITNNFSDRA LLGEGSYGRV YNATLSDGRA AVIKKLDPSA SQDSDADFAA QIAMVSKLKN 240 EYFLELVGYC LEDGNRMLAY QFATMALCVQ YESDFRPNMT IVVKAIQPLL NAKPAGPPAA 300 EPHEQALAHN VVAHGVTVFG SHPHDGKHFR QELDSIVNLT FQPDAMDNDV VGEDVGDSGA 360 PFGAHLIKAS FGFCSVTPIT SSGVLPSVGR TSRQARPDTN QHQDREDGTP ATIRSPGPPA 420 KQQRGASPTR LGSYQSGAAT HRMLITPSAS RYKPPTRSSR AKCFLLPHGG ASEEGPCCRG 480 PPTVLVVLLS SSWSLAEASP TPSPSAAPAH APPPRQPATS ASPPDAPPPL APRPKGHHRG 540 AHGNRAAPPP VDKYSRSWWQ RLNLGQKVGI ALAAVAVTMQ VAFLAFPGGA RAAAAADGEG 600 MGERLVVPLS RAATSGNGCL HDVSGSAWPP WISLEAGALF RRAVRGQHQT PRPGPVKRGP 660 TRKQSFRSVT GRQVTTTSPR RRTRRPEQIR AHSAPPHPGN IPKPSPSSSS SAGARSPAMD 720 DDAGASPSPS PSPSRSPSPL PVADPVTVAS APPGHIAVAI PLRKPSPSSG GGGGGREDAW 780 SDGATSALID AWGERFVALG RGSLRHPQWQ EVAEVVSSRD GYTKPPKSDA QCKNRIDTLK 840 KKYKVERAKR NSSWPFFDRL DDLLAPVYKL GSGSSSAARN TPPMVPPRFS FPQRTRTQLQ 900 PSAGVKRRMP SPPPKPSASS DSSDGFPPEP PLANGKRQRV EEPTPANGAE SSDHAQGLRE 960 LALAIRRLGE REQELRMEQE RLEATRELED QRVQFFLKMQ MELSKATGGA HSATPMAAAT 1020 AVDGNGSRRA AEATDVATSS NHKVRYRIKD SRHRHTAQQP HYQYSQNNSS AAAPSSGNGS 1080 DSDNKEDEDE ESQ

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence Send to blast

MRRARLLVRR CRAWWIRSRP FPAISLISSH LLSLSLSLSP SPIAGRNHRG RRCCSPPPSE  60
RELFWGRSRG RHDLLTAPRT NPRIIVVNSI VRSGDEGDGG GAEEDSYGPP ASQAAPPPNV  120
NAPGPTLSID QQFQFLLDRE TTNLTSRNRG GPRGPGAPRP GGPAKPVNID VPAIPFDELK  180
KITNNFSDRA LLGEGSYGRV YNATLSDGRA AVIKKLDPSA SQDSDADFAA QIAMVSKLKN  240
EYFLELVGYC LEDGNRMLAY QFATMALCVQ YESDFRPNMT IVVKAIQPLL NAKPAGPPAA  300
EPHEQALAHN VVAHGVTVFG SHPHDGKHFR QELDSIVNLT FQPDAMDNDV VGEDVGDSGA  360
PFGAHLIKAS FGFCSVTPIT SSGVLPSVGR TSRQARPDTN QHQDREDGTP ATIRSPGPPA  420
KQQRGASPTR LGSYQSGAAT HRMLITPSAS RYKPPTRSSR AKCFLLPHGG ASEEGPCCRG  480
PPTVLVVLLS SSWSLAEASP TPSPSAAPAH APPPRQPATS ASPPDAPPPL APRPKGHHRG  540
AHGNRAAPPP VDKYSRSWWQ RLNLGQKVGI ALAAVAVTMQ VAFLAFPGGA RAAAAADGEG  600
MGERLVVPLS RAATSGNGCL HDVSGSAWPP WISLEAGALF RRAVRGQHQT PRPGPVKRGP  660
TRKQSFRSVT GRQVTTTSPR RRTRRPEQIR AHSAPPHPGN IPKPSPSSSS SAGARSPAMD  720
DDAGASPSPS PSPSRSPSPL PVADPVTVAS APPGHIAVAI PLRKPSPSSG GGGGGREDAW  780
SDGATSALID AWGERFVALG RGSLRHPQWQ EVAEVVSSRD GYTKPPKSDA QCKNRIDTLK  840
KKYKVERAKR NSSWPFFDRL DDLLAPVYKL GSGSSSAARN TPPMVPPRFS FPQRTRTQLQ  900
PSAGVKRRMP SPPPKPSASS DSSDGFPPEP PLANGKRQRV EEPTPANGAE SSDHAQGLRE  960
LALAIRRLGE REQELRMEQE RLEATRELED QRVQFFLKMQ MELSKATGGA HSATPMAAAT  1020
AVDGNGSRRA AEATDVATSS NHKVRYRIKD SRHRHTAQQP HYQYSQNNSS AAAPSSGNGS  1080
DSDNKEDEDE ESQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5xd6_A	3e-22	169	263	7	99	Protein kinase superfamily protein
5xd6_B	3e-22	169	263	7	99	Protein kinase superfamily protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2404	30	69