PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00458.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 277aa    MW: 29772.9 Da    PI: 6.4044
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00458.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY39.51.1e-12248277937
                                     EEEEE--TT-SS-EEEEEE-ST.T---EEE CS
                            WRKY   9 KYGqKevkgsefprsYYrCtsa.gCpvkkk 37 
                                     KYGqK+ kg+++p +YYrCt+a  Cpv+k+
  Zmw_sc00458.1.g00010.1.sm.mkhc 248 KYGQKMAKGNPCPIAYYRCTMAvACPVRKQ 277
                                     9*********************9******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.5E-10248277IPR003657WRKY domain
SuperFamilySSF1182908.11E-9248277IPR003657WRKY domain
PfamPF031061.3E-8248277IPR003657WRKY domain
PROSITE profilePS5081113.448248277IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MERGGLSLLL RQGSGEFGPR REIREVDFFS RDDSGAQRRD GVDGPGGPGC EDVNIGLNLL  60
TAAAASSATA TTTVDGDEAT TAKDEKMEVT AVEGELRRVS EENRRLRGLL EELTRNYSVL  120
YQQLHQVTQQ HPHHHLPEDL ISNRASVLAH THLQASGAPN TSTRQYADGA GAEDEDSDGA  180
ADASPSPSNA AGNSDVVVDG KRRMSQDGTA PAPRQNGEQA PAEVPGRKAR VSVRARSEAP  240
MRWLPMGKYG QKMAKGNPCP IAYYRCTMAV ACPVRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004967624.11e-90probable WRKY transcription factor 31
TrEMBLK3XG053e-89K3XG05_SETIT; Uncharacterized protein
STRINGSi000824m5e-90(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43583260