PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00467.1.g00220.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 767aa MW: 82958.3 Da PI: 10.1895

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00467.1.g00220.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.6e-52	30	157	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelv++yL++kv + ++ i+evdi+++ePw+Lp +++ +e+ewyfFs rd+ky+tg r+nrat +g Zmw_sc00467.1.g00220.1.am.mk 30 LPPGFRFHPTDEELVTFYLAAKVFNGTCCG-VDIAEVDINRCEPWELPGAARMGEREWYFFSLRDRKYPTGLRTNRATGAG 109 79***********************777.34***********8888899********************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatgkd+ev+++ +g+l+g+kktLvfykgrap+gekt+Wv+heyrl Zmw_sc00467.1.g00220.1.am.mk 110 YWKATGKDREVICTtTGALIGMKKTLVFYKGRAPRGEKTKWVLHEYRL 157 *******99878899*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.35E-61	19	186	IPR003441	NAC domain
PROSITE profile	PS51005	58.45	30	186	IPR003441	NAC domain
Pfam	PF02365	1.3E-26	31	157	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence Send to blast
MMMHQPQAMG DALWDILGEE MAAAAGEHCL PPGFRFHPTD EELVTFYLAA KVFNGTCCGV 60 DIAEVDINRC EPWELPGAAR MGEREWYFFS LRDRKYPTGL RTNRATGAGY WKATGKDREV 120 ICTTTGALIG MKKTLVFYKG RAPRGEKTKW VLHEYRLDGD FAAGRRFCKV TDLSAEEWVI 180 CRIFHKAVDQ YSKMVMSMSP YYHATDPSSF CFQQEPPHAA LPLPNPSICS GLAHALPFHH 240 SLENHHQGKS NVDTNGLPAA SSLDQPNGSG GVNMCDSSAM PMLPAFPSFA SVVVTGKAAP 300 HQQEAGVNAG PPEPPTLLDG YIAHSGVLYE MSPPAAPRGA SEMDGDHECL PMQGVGLAGA 360 GEEQVATGRP RRDPCVRAPR DQSLVNRRRR RIGSGRRPAP IDLVVPKGWP ATRFAAKVKP 420 LTAGRQQQIA VNLKSQIFVK TEEDRQSLYV TTLPLDWVGK RPTKPLAQHQ IEYDAASHLN 480 SPFLSNSCLP GHWAAVRRET GRMWAARGRP QLLTNNIPRC CFSGFRWEFR RRSASEPGEP 540 PSAFSDELGR GASHTQLFSR QPGPMKQSGP CSTTPIGPGP QASLGTRAEQ KSSRHRAAAG 600 PRLAVDVGRP RACSGARARP EEQGLRSVSV LPRASRRRGN AGVITAGEKT LTPHCGSSRS 660 RAPPAPRING PGAAGDGPRA GDRTRVCPPC VVVIRNGTGR MHGIGMAGTS AGGTRPCRSA 720 VNSAGTARAS MHRAAARPHA DTHVRMLHGK LRWLGAHRGT RAVALSS

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence Send to blast

MMMHQPQAMG DALWDILGEE MAAAAGEHCL PPGFRFHPTD EELVTFYLAA KVFNGTCCGV  60
DIAEVDINRC EPWELPGAAR MGEREWYFFS LRDRKYPTGL RTNRATGAGY WKATGKDREV  120
ICTTTGALIG MKKTLVFYKG RAPRGEKTKW VLHEYRLDGD FAAGRRFCKV TDLSAEEWVI  180
CRIFHKAVDQ YSKMVMSMSP YYHATDPSSF CFQQEPPHAA LPLPNPSICS GLAHALPFHH  240
SLENHHQGKS NVDTNGLPAA SSLDQPNGSG GVNMCDSSAM PMLPAFPSFA SVVVTGKAAP  300
HQQEAGVNAG PPEPPTLLDG YIAHSGVLYE MSPPAAPRGA SEMDGDHECL PMQGVGLAGA  360
GEEQVATGRP RRDPCVRAPR DQSLVNRRRR RIGSGRRPAP IDLVVPKGWP ATRFAAKVKP  420
LTAGRQQQIA VNLKSQIFVK TEEDRQSLYV TTLPLDWVGK RPTKPLAQHQ IEYDAASHLN  480
SPFLSNSCLP GHWAAVRRET GRMWAARGRP QLLTNNIPRC CFSGFRWEFR RRSASEPGEP  540
PSAFSDELGR GASHTQLFSR QPGPMKQSGP CSTTPIGPGP QASLGTRAEQ KSSRHRAAAG  600
PRLAVDVGRP RACSGARARP EEQGLRSVSV LPRASRRRGN AGVITAGEKT LTPHCGSSRS  660
RAPPAPRING PGAAGDGPRA GDRTRVCPPC VVVIRNGTGR MHGIGMAGTS AGGTRPCRSA  720
VNSAGTARAS MHRAAARPHA DTHVRMLHGK LRWLGAHRGT RAVALSS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	2e-46	30	186	20	168	NAC domain-containing protein 19
3swm_B	2e-46	30	186	20	168	NAC domain-containing protein 19
3swm_C	2e-46	30	186	20	168	NAC domain-containing protein 19
3swm_D	2e-46	30	186	20	168	NAC domain-containing protein 19
3swp_A	2e-46	30	186	20	168	NAC domain-containing protein 19
3swp_B	2e-46	30	186	20	168	NAC domain-containing protein 19
3swp_C	2e-46	30	186	20	168	NAC domain-containing protein 19
3swp_D	2e-46	30	186	20	168	NAC domain-containing protein 19

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11237	33	41