PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00476.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 196aa    MW: 22267.1 Da    PI: 10.8563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00476.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-1990140155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++y+G+r+++ +g+W+A+Irdp++     r++lg+f taeeAa+a++  +++++g
  Zmw_sc00476.1.g00090.1.am.mk  90 TQYRGIRRRP-WGKWAAQIRDPRK---GVRVWLGTFSTAEEAARAYDLEARRIRG 140
                                   58********.**********954...4***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.52E-2890150No hitNo description
SMARTSM003802.2E-3691154IPR001471AP2/ERF domain
PfamPF008472.5E-1291140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-3191149IPR001471AP2/ERF domain
PROSITE profilePS5103224.07891148IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-2291149IPR016177DNA-binding domain
PRINTSPR003675.9E-1292103IPR001471AP2/ERF domain
PRINTSPR003675.9E-12114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MCGGAVLGDL YSRTVTAGDL WADSGSRESG KSRKGKKNSW EFRADDSDDF EADFDEFQDG  60
DSEEEVDFVY GNQEVLRKSS KFGSRKRKKT QYRGIRRRPW GKWAAQIRDP RKGVRVWLGT  120
FSTAEEAARA YDLEARRIRG IKAKVNFPDT VPASKRRRRS GHVAARAAKK SNSALKQLEH  180
FIMRPVRLVS FLAAMT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-20911481472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18488RKRKK
28498RKRKKTQYRGIRRRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002463183.12e-59ethylene-responsive transcription factor ERF073
RefseqXP_021308253.12e-59ethylene-responsive transcription factor ERF073
TrEMBLA0A1E5WNS84e-65A0A1E5WNS8_9POAL; Ethylene-responsive transcription factor 1
STRINGPavir.Ba00410.1.p3e-60(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145602123