PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00505.1.g00370.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 662aa MW: 73137.4 Da PI: 10.197

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00505.1.g00370.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	91.8	7.5e-29	407	504	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 +++rlws+ De+v+L+Gl ++ak+g+ ++ di++++ + + +s+kvs++ql++K+rrLK+K+++ +++k+g+ep+f Zmw_sc00505.1.g00370.1.am.mk 407 RPSRLWSQGDELVILRGLAAYRAKHGAlpGSMYDISKLHGNIGDVLSVKVSTTQLSDKVRRLKQKYHQLATRTKNGREPNF 487 679**********************666677******************************************** PP DUF573 81 skehdqkifelskkiWg 97 +++d++++el kk+Wg Zmw_sc00505.1.g00370.1.am.mk 488 PTSQDHSVYELGKKVWG 504 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03134	5.9E-25	29	102	IPR004345	TB2/DP1/HVA22-related protein
Pfam	PF04504	2.1E-26	409	504	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence Send to blast
MGKSWALITH LHALAGYASV LSSLSIVWYA SICAMESTSK LDDEQWLAYW ILYSFITLME 60 MAAEQVLYWI PLWYEVKLLF VAWLVLPQFR GASFIYDRFV REQLRKHGVR LHGHGADHGP 120 HHDLKFVYRG LPEEPSSNGT GPKDIGSRKK IQLPENSVSF GSRPSSSFSK PQSEMVSPAR 180 CMCSTRSMTE PPDSQRDRPP ASQPHVARHA NQSYPPAPHR TNSAHGHRTP ANPTPRLRNW 240 QYRSEITIPV HTSARRSRSR TTPCPARASA SARRPPFAGM APKRPAAASG SASEASDVDA 300 SASRHPPSPF PSKTSSPPSN PNPKSAPAPA AEDSAAAGSD SGAAYDSDAD HRPXXXXLPS 360 RAEAAAIKPL SSRPMDPPRR SAPSFSESRP KRPRSAAIPA VMEHLKRPSR LWSQGDELVI 420 LRGLAAYRAK HGALPGSMYD ISKLHGNIGD VLSVKVSTTQ LSDKVRRLKQ KYHQLATRTK 480 NGREPNFPTS QDHSVYELGK KVWGAIGSAG ADADAGGVGA IVEHENTDGL HSEEEHQSGE 540 SDGDMDSWRD DHDRKNKRVK PIAMANGNGT RFGAMSSNRR GKAEFEKGKD AYPYLWETVE 600 ELSRQHPNGV AFKKAFEMIE GTKARGMEEK LRKFRVAEVR HQLRRMELMK ETVKMVLDAL 660 EG

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence Send to blast

MGKSWALITH LHALAGYASV LSSLSIVWYA SICAMESTSK LDDEQWLAYW ILYSFITLME  60
MAAEQVLYWI PLWYEVKLLF VAWLVLPQFR GASFIYDRFV REQLRKHGVR LHGHGADHGP  120
HHDLKFVYRG LPEEPSSNGT GPKDIGSRKK IQLPENSVSF GSRPSSSFSK PQSEMVSPAR  180
CMCSTRSMTE PPDSQRDRPP ASQPHVARHA NQSYPPAPHR TNSAHGHRTP ANPTPRLRNW  240
QYRSEITIPV HTSARRSRSR TTPCPARASA SARRPPFAGM APKRPAAASG SASEASDVDA  300
SASRHPPSPF PSKTSSPPSN PNPKSAPAPA AEDSAAAGSD SGAAYDSDAD HRPXXXXLPS  360
RAEAAAIKPL SSRPMDPPRR SAPSFSESRP KRPRSAAIPA VMEHLKRPSR LWSQGDELVI  420
LRGLAAYRAK HGALPGSMYD ISKLHGNIGD VLSVKVSTTQ LSDKVRRLKQ KYHQLATRTK  480
NGREPNFPTS QDHSVYELGK KVWGAIGSAG ADADAGGVGA IVEHENTDGL HSEEEHQSGE  540
SDGDMDSWRD DHDRKNKRVK PIAMANGNGT RFGAMSSNRR GKAEFEKGKD AYPYLWETVE  600
ELSRQHPNGV AFKKAFEMIE GTKARGMEEK LRKFRVAEVR HQLRRMELMK ETVKMVLDAL  660
EG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002460312.1	1e-144	STOREKEEPER protein
TrEMBL	C5X278	1e-143	C5X278_SORBI; Uncharacterized protein
STRING	Sb02g026310.1	1e-144	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87