PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00532.1.g00310.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

C2H2

Protein Properties

Length: 753aa MW: 80204.2 Da PI: 8.9544

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00532.1.g00310.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.3e-05	240	262	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg+ Fs +++L+ H + H Zmw_sc00532.1.g00310.1.am.mk 240 SCHRCGEQFSKWETLEAHHLSkH 262 7*****************99877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.746	239	267	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	241	262	IPR007087	Zinc finger, C2H2
SuperFamily	SSF56399	1.52E-15	264	463	No hit	No description
Gene3D	G3DSA:3.90.228.10	3.8E-11	288	436	IPR012317	Poly(ADP-ribose) polymerase, catalytic domain
Pfam	PF04577	1.0E-23	494	696	IPR007657	Glycosyltransferase AER61, uncharacterised

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003950	Molecular Function	NAD+ ADP-ribosyltransferase activity
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence Send to blast
MGERRRRASA AAAGGGGVRA EEEKAAAPGK AAPPTVWFAL KKSLHCRSAP SDVHVPRPKA 60 APSAGGEHLS SIVTKRAAWS GCSRSIANLR DVIHGSKRHP GQPPSCSPRS IGSSEFLNPI 120 AHEVVLSTNS RCELKITGFG GLGAAGAAHD SDGDAGCVVS SFVGTLRPGT PGPAWAAGHA 180 GLQYSGSCRG NSVRCTPPRS PNVLLERNGS VVLSSRRASC EETTTKSGGV NNKGSGGGMS 240 CHRCGEQFSK WETLEAHHLS KHAVTELMEG DSSRKIVEII CRTSLLKSES SCVRIERVFK 300 VHNTQRTLSR FEEYREAVKL KASKLPKKHP RCLADGNELL RFHGATISCG LGGGGSSPSL 360 CASDKCAVCR IIRHGFSSKK EASCKAGGVG VFTTSTSGRA FESIDVPADD DPADATRKAL 420 LVCRVVAGRE FVGQTGFDSL AGKELYLLNP RALLPCFVVT VTRLADPAAA PAPCTVTYVV 480 PAVLFAIGGH SGRNYFHDFT DVLVPLFAAS RRYGGDVQFL VSNVVQPRWL GKYDALRVDG 540 DAHSRCFPHV TVGLHIKKLF SIVVDPESSV PGSGGGPQLS MADFTRFLRE TYALPRGAAV 600 SLAQEPDKKP RLLLIHRGHY RRLLNEEEVA RAAEAAGFET AVTELRGDAP VEEQARAVNS 660 FDELLGVHGA GLTNAVFLPP GAVLIQVVPY GKMEFPAKDM GLKYLGYSVG AEESSLLEDP 720 YSVHRSGWDK DVRVNVSRFA PTLALALEHL CQR

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence Send to blast

MGERRRRASA AAAGGGGVRA EEEKAAAPGK AAPPTVWFAL KKSLHCRSAP SDVHVPRPKA  60
APSAGGEHLS SIVTKRAAWS GCSRSIANLR DVIHGSKRHP GQPPSCSPRS IGSSEFLNPI  120
AHEVVLSTNS RCELKITGFG GLGAAGAAHD SDGDAGCVVS SFVGTLRPGT PGPAWAAGHA  180
GLQYSGSCRG NSVRCTPPRS PNVLLERNGS VVLSSRRASC EETTTKSGGV NNKGSGGGMS  240
CHRCGEQFSK WETLEAHHLS KHAVTELMEG DSSRKIVEII CRTSLLKSES SCVRIERVFK  300
VHNTQRTLSR FEEYREAVKL KASKLPKKHP RCLADGNELL RFHGATISCG LGGGGSSPSL  360
CASDKCAVCR IIRHGFSSKK EASCKAGGVG VFTTSTSGRA FESIDVPADD DPADATRKAL  420
LVCRVVAGRE FVGQTGFDSL AGKELYLLNP RALLPCFVVT VTRLADPAAA PAPCTVTYVV  480
PAVLFAIGGH SGRNYFHDFT DVLVPLFAAS RRYGGDVQFL VSNVVQPRWL GKYDALRVDG  540
DAHSRCFPHV TVGLHIKKLF SIVVDPESSV PGSGGGPQLS MADFTRFLRE TYALPRGAAV  600
SLAQEPDKKP RLLLIHRGHY RRLLNEEEVA RAAEAAGFET AVTELRGDAP VEEQARAVNS  660
FDELLGVHGA GLTNAVFLPP GAVLIQVVPY GKMEFPAKDM GLKYLGYSVG AEESSLLEDP  720
YSVHRSGWDK DVRVNVSRFA PTLALALEHL CQR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015635096.1	0.0	uncharacterized protein LOC4327046
TrEMBL	Q8LQM0	0.0	Q8LQM0_ORYSJ; Os01g0785900 protein
STRING	OS01T0785900-01	0.0	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3277	28	41