PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00624.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 1670aa MW: 180954 Da PI: 10.8006

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00624.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.5	1.5e-18	358	413	1	47
TSSS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEde+lv ++k++G g W++Ia++++ gRt++++k++w+++ Zmw_sc00624.1.g00040.1.am.mk 358 KGPWTAEEDEKLVAYIKKHGQGnwrtlpknagKWSAIAARLP-GRTDNEIKNYWNTH 413 79**************************************.**********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.7E-23	349	422	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.44E-15	352	424	IPR009057	Homeodomain-like
PROSITE profile	PS51294	22.349	353	418	IPR017930	Myb domain
SMART	SM00717	6.9E-19	357	416	IPR001005	SANT/Myb domain
Pfam	PF00249	7.4E-16	358	413	IPR001005	SANT/Myb domain
CDD	cd00167	1.29E-14	360	414	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1670 aa Download sequence Send to blast
MHGSASRACV LVRSLADHSL VYCEAGDTRT LCYLSLSLLA YATRRGRPGS NRRCKHIAGA 60 LTGVQQLARR NAVMFYISLV ADERRARFCK SRAPAGVRRA NGHRRSEKLS TTSARALFAC 120 GAFTRAATRV VRRRCRDEKG YRGRPAGRAQ SGGSGEPCMH RTQDAAGFAR GVRDSGSNSS 180 GEKVKREHIL GGRETDPSDY APGHGVDSPS RSEAVGLWSA LFCSSSADVS AANARPAAAL 240 ASRRATSGAC PGSALRSPVV HPPSPDASLS RPPWPRRARG AQRPAPNPVD FAGYPSRSRA 300 YKAGAPSHLL LDLLSSFLAA GSRRDKPGLF PHDPIRLRAG IELQMGRAPC CDKTGLKKGP 360 WTAEEDEKLV AYIKKHGQGN WRTLPKNAGK WSAIAARLPG RTDNEIKNYW NTHIRKRLLR 420 MGIDPVTHAP RLDLLDLSGL LKPAAHAAPA YYPTQADLDA LRALEPLASY PDLLRLASTL 480 LSGTVQAPAV ADQQLLLPWL LHQTQMTQQA AAMAPQEVVP MQADHQFMQP AASNATCQVP 540 GLVHTNQTTI QQTGAAQQQQ IQDIPAASSY VDSLLDMPAL MQMVQQQQSD ASNMQQHWSS 600 TARSSNNNVG GSGVSTPSSS PVTRLSNNNS TTSTTTTYGA TTTNDAATLF NMPLSDLLDV 660 SDYIVAEVAS HDWLRRPLSL SFRITASSPV KKNRARSEYA YTDQTNTPPA EPIDLNPPQP 720 PPPLAPDFYR RVISPRIDTT TRTGSSGISS PPPAGWQRRA IDVAVPSCYG RSGHLCARAA 780 FLGAALKHAA ISSSRRCSES LIGQEEEAEG DSGPRTARGR PASSAKWSES ERVVSRAPLR 840 RCSCLRGTAA QGRARHGERL GAARFDLRAQ QRRKGTEKTQ KSRRRRPAAA TSRRRFRRSE 900 YIRGSVGGSK SAGRRPGACV SRCLSTYRRA TPPVKFPCPQ PTKKASRSRR WECFATGARK 960 VLFCLPRSIR QTFALRTVTR WCYSKLIVSA ACVHGHRHHA AATPLSDGQT MLLPLFSSDA 1020 FLDENPTRSS RQTPPLSSIA ELPCPCIHQI SANPGIQGAV LVIVPGCNPS RRAFPCMPCL 1080 PLETSGLPGE RVWRRSCKAA KRQLKSQKRD IPEWIRAGVL LPMLIDGDAA VGTRPVCNRL 1140 CLPFRSRKDE ENCVGFRLCR LLVSRHQKLR RSRHAGTEAM PDSHTELPFP EVQHCFRRTT 1200 QDARQPSTSG RAPEFRRIST VSFLRFTHTH RHYKVAVSTA PDAQDRRMPQ PATSVHVKGL 1260 VREPEGPAGK STATSSPAAM MAHLTAVLLL ALVAAVHASD VPSASFPISQ AQSPSNASSP 1320 SSSPSPPCHL DLSAELFGGV AAACGAGGGP GSLDRGRCCP VLAAWLFAAH ARTAXXXXXX 1380 XXXXXXXPTA AVKDLEKSCR NASYAGCSRC VQSLQKLKGN VSREVSGGDR ARRMLGRDCQ 1440 LMGLTWLLAK NKTAYIPTVS AVLRAMLYAA HPTEPVSGKS GSSSAAAPPR CSPDQENMPL 1500 AVDSLQFEHS STASSAVVAA ATAAPPLVSA AFLGLVLCLT AEHLRAGDWR KMSQRYELWV 1560 LASKGTVHVL GSVARRASES ACPQATRLPS SRAAFLSPAR LLFLWLEDGR GFLRASCSWW 1620 LYSARFVLQT PQTAIPVIEN LQRVGNQDQP RAPPQRPMFC YCAPWSRYFS

Sequence ? help Back to Top

Protein Sequence Length: 1670 aa Download sequence Send to blast

MHGSASRACV LVRSLADHSL VYCEAGDTRT LCYLSLSLLA YATRRGRPGS NRRCKHIAGA  60
LTGVQQLARR NAVMFYISLV ADERRARFCK SRAPAGVRRA NGHRRSEKLS TTSARALFAC  120
GAFTRAATRV VRRRCRDEKG YRGRPAGRAQ SGGSGEPCMH RTQDAAGFAR GVRDSGSNSS  180
GEKVKREHIL GGRETDPSDY APGHGVDSPS RSEAVGLWSA LFCSSSADVS AANARPAAAL  240
ASRRATSGAC PGSALRSPVV HPPSPDASLS RPPWPRRARG AQRPAPNPVD FAGYPSRSRA  300
YKAGAPSHLL LDLLSSFLAA GSRRDKPGLF PHDPIRLRAG IELQMGRAPC CDKTGLKKGP  360
WTAEEDEKLV AYIKKHGQGN WRTLPKNAGK WSAIAARLPG RTDNEIKNYW NTHIRKRLLR  420
MGIDPVTHAP RLDLLDLSGL LKPAAHAAPA YYPTQADLDA LRALEPLASY PDLLRLASTL  480
LSGTVQAPAV ADQQLLLPWL LHQTQMTQQA AAMAPQEVVP MQADHQFMQP AASNATCQVP  540
GLVHTNQTTI QQTGAAQQQQ IQDIPAASSY VDSLLDMPAL MQMVQQQQSD ASNMQQHWSS  600
TARSSNNNVG GSGVSTPSSS PVTRLSNNNS TTSTTTTYGA TTTNDAATLF NMPLSDLLDV  660
SDYIVAEVAS HDWLRRPLSL SFRITASSPV KKNRARSEYA YTDQTNTPPA EPIDLNPPQP  720
PPPLAPDFYR RVISPRIDTT TRTGSSGISS PPPAGWQRRA IDVAVPSCYG RSGHLCARAA  780
FLGAALKHAA ISSSRRCSES LIGQEEEAEG DSGPRTARGR PASSAKWSES ERVVSRAPLR  840
RCSCLRGTAA QGRARHGERL GAARFDLRAQ QRRKGTEKTQ KSRRRRPAAA TSRRRFRRSE  900
YIRGSVGGSK SAGRRPGACV SRCLSTYRRA TPPVKFPCPQ PTKKASRSRR WECFATGARK  960
VLFCLPRSIR QTFALRTVTR WCYSKLIVSA ACVHGHRHHA AATPLSDGQT MLLPLFSSDA  1020
FLDENPTRSS RQTPPLSSIA ELPCPCIHQI SANPGIQGAV LVIVPGCNPS RRAFPCMPCL  1080
PLETSGLPGE RVWRRSCKAA KRQLKSQKRD IPEWIRAGVL LPMLIDGDAA VGTRPVCNRL  1140
CLPFRSRKDE ENCVGFRLCR LLVSRHQKLR RSRHAGTEAM PDSHTELPFP EVQHCFRRTT  1200
QDARQPSTSG RAPEFRRIST VSFLRFTHTH RHYKVAVSTA PDAQDRRMPQ PATSVHVKGL  1260
VREPEGPAGK STATSSPAAM MAHLTAVLLL ALVAAVHASD VPSASFPISQ AQSPSNASSP  1320
SSSPSPPCHL DLSAELFGGV AAACGAGGGP GSLDRGRCCP VLAAWLFAAH ARTAXXXXXX  1380
XXXXXXXPTA AVKDLEKSCR NASYAGCSRC VQSLQKLKGN VSREVSGGDR ARRMLGRDCQ  1440
LMGLTWLLAK NKTAYIPTVS AVLRAMLYAA HPTEPVSGKS GSSSAAAPPR CSPDQENMPL  1500
AVDSLQFEHS STASSAVVAA ATAAPPLVSA AFLGLVLCLT AEHLRAGDWR KMSQRYELWV  1560
LASKGTVHVL GSVARRASES ACPQATRLPS SRAAFLSPAR LLFLWLEDGR GFLRASCSWW  1620
LYSARFVLQT PQTAIPVIEN LQRVGNQDQP RAPPQRPMFC YCAPWSRYFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	871	885	RRKGTEKTQKSRRRR