PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00638.1.g00190.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 232aa MW: 25775.3 Da PI: 9.8459

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00638.1.g00190.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.9	3.2e-10	198	229	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT eEd++l d+++++G g+W++ ++ g Zmw_sc00638.1.g00190.1.am.mk 198 KGPWTLEEDQKLMDYIQKHGHGSWRALPKLAG 229 79************************999877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-12	189	227	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.617	193	232	IPR017930	Myb domain
SuperFamily	SSF46689	9.33E-9	195	227	IPR009057	Homeodomain-like
Pfam	PF00249	1.9E-8	198	229	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MVTLSTCPLL VFRFSKHNMI EPIDHQPIRR QRRSRRIANQ KYAAYERTSW SRREGDARGD 60 DDEAQTLSLP ALPHANVARV ACMGKLSRHL GEHVELIASN LRANRQKHGG RLISRALEAN 120 PGFAEFSASS VGEIWGSPAG WIKMCSGDQP SKLSSRKFSG SQEEAACLPP SQLHHSTPVL 180 SHLSMGRAPC CDENGLKKGP WTLEEDQKLM DYIQKHGHGS WRALPKLAGS HV

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP33060	2	2