PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00656.1.g00210.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 242aa    MW: 25261.2 Da    PI: 4.4671
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00656.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-162371355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ykGVr ++ +g+Wv+e+r p   g ++r++lg++ tae Aa+a++aa ++l+g
  Zmw_sc00656.1.g00210.1.am.mk 23 YKGVRMRS-WGSWVSEVRAP---GAKTRIWLGSHSTAEAAARAYDAALLCLRG 71
                                  9****998.*******9998...445*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.29E-162282IPR016177DNA-binding domain
SMARTSM003806.8E-292287IPR001471AP2/ERF domain
PROSITE profilePS5103220.7842281IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-262281IPR001471AP2/ERF domain
PfamPF008474.1E-102371IPR001471AP2/ERF domain
PRINTSPR003673.1E-82334IPR001471AP2/ERF domain
CDDcd000181.16E-142383No hitNo description
PRINTSPR003673.1E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MVKTAALCND TAAAKWNGGK RTYKGVRMRS WGSWVSEVRA PGAKTRIWLG SHSTAEAAAR  60
AYDAALLCLR GSAAAADLNF PVQFPVNDIP HAAMSPKSIQ RVAAAAAAAT SATAFASRAD  120
DADVACCSGD DSTPACSSSS GSDASAVSSP GSTVTSEAET DAACCHGDQK LRDGDVVDYS  180
LLEDIDAYFP SPKCMEYAMM DPCSAFFAPK NAPTPMAMMS DDDVCWLDGD HVALWAFSTL  240
DC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964908.11e-77ethylene-responsive transcription factor ERF014
TrEMBLK3Y1B33e-76K3Y1B3_SETIT; Uncharacterized protein
STRINGSi007977m5e-77(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469