PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00693.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 508aa MW: 52130.4 Da PI: 8.8693

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00693.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.4e-39	60	120	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+ Zmw_sc00693.1.g00010.1.am.mk 60 PEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 120 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.2E-32	62	118	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.609	64	118	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-26	64	117	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	66	102	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence Send to blast
DRATAAVRAP QAAGCCGVCC MASSTAVAAS GDDVVGPRNQ GTGGTTPPPA PQQQPPPPPP 60 EQGLRCPRCD SPNTKFCYYN NYSLSQPRHF CKTCRRYWTK GGALRNVPVG GGCRKNKRSR 120 SAASASAAAV AAASSRLSLN LPIEGIGGAS ADQQAAARLG FLGGGAPLPV VSSPIGAASA 180 SDFHGGSAVG MMALPRFNAP AVGHYVPFGE WPSAPGVDIS CGGGSGNGGH AMSGGQTGAV 240 SSSIASSIES LSFINQDLHW KLQQQRLATM FLGPPPSSGT TVHVEGAAAA PEHVGGPFLQ 300 MAGTSTMEAV PAATSWFMDS SYVLPPPPAT IVTTTNGNVQ SGRSSADDDN ATSNNNCGSA 360 IPAWGDMSTF AMLPSREGRS LPAANGIHGN EGPVTDDSVC LPRFWFTGIP SAPRLASSLI 420 AFYYSWLARS PRHGRRLPGA HVYTPRKHEA SCKNVVAPVL LSPPVAAQGD GEAHSGRRPV 480 RVAPGNSDGL TSMSGPERLH ARRLTPSH

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence Send to blast

DRATAAVRAP QAAGCCGVCC MASSTAVAAS GDDVVGPRNQ GTGGTTPPPA PQQQPPPPPP  60
EQGLRCPRCD SPNTKFCYYN NYSLSQPRHF CKTCRRYWTK GGALRNVPVG GGCRKNKRSR  120
SAASASAAAV AAASSRLSLN LPIEGIGGAS ADQQAAARLG FLGGGAPLPV VSSPIGAASA  180
SDFHGGSAVG MMALPRFNAP AVGHYVPFGE WPSAPGVDIS CGGGSGNGGH AMSGGQTGAV  240
SSSIASSIES LSFINQDLHW KLQQQRLATM FLGPPPSSGT TVHVEGAAAA PEHVGGPFLQ  300
MAGTSTMEAV PAATSWFMDS SYVLPPPPAT IVTTTNGNVQ SGRSSADDDN ATSNNNCGSA  360
IPAWGDMSTF AMLPSREGRS LPAANGIHGN EGPVTDDSVC LPRFWFTGIP SAPRLASSLI  420
AFYYSWLARS PRHGRRLPGA HVYTPRKHEA SCKNVVAPVL LSPPVAAQGD GEAHSGRRPV  480
RVAPGNSDGL TSMSGPERLH ARRLTPSH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796800.1	1e-113	dof zinc finger protein DOF5.7-like
TrEMBL	A0A3L6SBJ5	1e-116	A0A3L6SBJ5_PANMI; Dof zinc finger protein DOF5.7-like
STRING	Si036311m	1e-111	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367