PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00715.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 274aa    MW: 29646.2 Da    PI: 5.8361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00715.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2292.7e-0964942755
                           AP2 27 kr..krfslgkfgtaeeAakaaiaarkkleg 55
                                  +r  kr +lg+f+taeeAa+ ++ a+ +l+g
  Zmw_sc00715.1.g00110.1.am.mk 64 VRerKRLWLGTFDTAEEAAAVYDDAAVRLKG 94
                                  3346***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.65626102IPR001471AP2/ERF domain
SMARTSM003801.0E-1058108IPR001471AP2/ERF domain
PfamPF008471.4E-46094IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-1565103IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1165104IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MVDEICRPGG FAVMSSSDSL AAGRSRRVGL PLPHPKRVRV SFVDADATDT DCSGDEGERG  60
NRRVRERKRL WLGTFDTAEE AAAVYDDAAV RLKGSQAVTN FPSSVAAAEA RVRSPRKEPR  120
PRGRPVCDAA SVARTSPQAP SPALQQARRD DAVPSCEFEP PTSVLRHADE VAFQAFDFLY  180
GGLGELAAAA PPKAAEFEWM PWWESEDFVT SGVTPASAVT WEQQRAQPVR GQPAAWWAPP  240
GAALCVGCLG QHGAAGRPPR MEATEQRPMF LEYS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962466.16e-36ethylene-responsive transcription factor CRF3
TrEMBLA0A0D9ZXB53e-57A0A0D9ZXB5_9ORYZ; Uncharacterized protein
STRINGOGLUM05G12060.14e-58(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131402226