PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00723.1.g00290.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 662aa MW: 72847.4 Da PI: 5.1791

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00723.1.g00290.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.6e-09	100	130	1	31
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 rg+W+ eEd+llv++++ +G g+W++ ar+ Zmw_sc00723.1.g00290.1.am.mk 100 RGPWSVEEDLLLVNYIAAHGEGQWNALARCA 130 89**************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	7.143	95	128	IPR017877	Myb-like domain
SuperFamily	SSF46689	6.4E-7	96	132	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.3E-8	98	131	IPR009057	Homeodomain-like
Pfam	PF00249	1.4E-6	100	129	IPR001005	SANT/Myb domain
CDD	cd00167	2.15E-5	102	141	No hit	No description
SuperFamily	SSF81301	1.2E-5	499	552	No hit	No description
Gene3D	G3DSA:3.30.460.10	9.8E-10	501	553	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence Send to blast
MSIKLLRVLD STHTRALHMM SFYSEEQVTS GCTLLSSESS PDLSAASSPT TGDHERVPQN 60 EVAEKGQIKL DIRAMKMMAV REQREMSSED ESQVSGDLRR GPWSVEEDLL LVNYIAAHGE 120 GQWNALARCA DATPPSQLQQ FHHFNEVELS YTTAASSSSS VSTDGMQQQP PLVSQPEMVS 180 AAEGNCWSTC TDNDNNNNDS MKKSSMSLGA DTWCQPPNAS TTACYNPAQY LGASETCWSS 240 VVPADPFSTG VYAADMAPLL PDLGETMWGA DDLWYTQIMG FPETEREKTR CLGQDAAHMI 300 QPVRYGGPKA NEDAEVVQCR PPPAQLLPHF LERRTSAPRA PPRVYNRRRC LLALLLPSFL 360 LSDLNPLASA AGDGRVRHDV PGXXXSSSQT SIPWRPPPVT GASAMTYPAT TAPVPRWLYG 420 PMGPSDYFAD SSPSGSQGPP QAYLSWCPFR RPAAPRVPAL SSAAPDRHPA RPRLSCGTGP 480 PPLLFPRSGE FNPVRVAGAV PSPEDYKKRE KVIRELQKIV THWVKAVAYE QSVPPRITTG 540 TVLTYGSYTL GLEKIGIECD PCPLEQIDHA VMEPNIVYYW GLITQTIIPL DTYSLREDFM 600 EDINTDIYGK VKCTQSELTV SLVGLPQLPK SMWSHSVSWH YMPYCILGYP YQEAAQDQRA 660 IS

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence Send to blast

MSIKLLRVLD STHTRALHMM SFYSEEQVTS GCTLLSSESS PDLSAASSPT TGDHERVPQN  60
EVAEKGQIKL DIRAMKMMAV REQREMSSED ESQVSGDLRR GPWSVEEDLL LVNYIAAHGE  120
GQWNALARCA DATPPSQLQQ FHHFNEVELS YTTAASSSSS VSTDGMQQQP PLVSQPEMVS  180
AAEGNCWSTC TDNDNNNNDS MKKSSMSLGA DTWCQPPNAS TTACYNPAQY LGASETCWSS  240
VVPADPFSTG VYAADMAPLL PDLGETMWGA DDLWYTQIMG FPETEREKTR CLGQDAAHMI  300
QPVRYGGPKA NEDAEVVQCR PPPAQLLPHF LERRTSAPRA PPRVYNRRRC LLALLLPSFL  360
LSDLNPLASA AGDGRVRHDV PGXXXSSSQT SIPWRPPPVT GASAMTYPAT TAPVPRWLYG  420
PMGPSDYFAD SSPSGSQGPP QAYLSWCPFR RPAAPRVPAL SSAAPDRHPA RPRLSCGTGP  480
PPLLFPRSGE FNPVRVAGAV PSPEDYKKRE KVIRELQKIV THWVKAVAYE QSVPPRITTG  540
TVLTYGSYTL GLEKIGIECD PCPLEQIDHA VMEPNIVYYW GLITQTIIPL DTYSLREDFM  600
EDINTDIYGK VKCTQSELTV SLVGLPQLPK SMWSHSVSWH YMPYCILGYP YQEAAQDQRA  660
IS