PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00729.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 355aa    MW: 38063.7 Da    PI: 9.3707
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00729.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.1e-28116173359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   D ++WrKYGqK++kgs++pr+YYrC++  +C+++k+ve+++ dp +++ tY+geH h+
  Zmw_sc00729.1.g00040.1.sm.mk 116 DLWAWRKYGQKPIKGSQYPRGYYRCSTDkDCKARKQVECCRADPGTLILTYTGEHSHP 173
                                   99***********************9998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-28110175IPR003657WRKY domain
SuperFamilySSF1182902.22E-24113175IPR003657WRKY domain
SMARTSM007743.8E-32114174IPR003657WRKY domain
PROSITE profilePS5081128.449116175IPR003657WRKY domain
PfamPF031067.1E-23116173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MEGDLGWCGA GSSNNWDLHA VVRFACGDTS VPPSDDAFPW PGPLQPLLTD SAVDDPSRRP  60
QPSSPGNEQP TTQQPARAEE APAKPRAKPT RSKRKSKKRQ VNKEVTRVPV GSPSPDLWAW  120
RKYGQKPIKG SQYPRGYYRC STDKDCKARK QVECCRADPG TLILTYTGEH SHPVPLYRNS  180
LAGTTRSKPQ QQQSASRTRR TTTPSPSGCC WRTRRRWPPR TTRCSSSSPM SSLGRVFRAS  240
GVGCDDVMLF PKPEEPAPAS GNCSGACADA MLFPNNKPDV PVGPPGPVIT GGAEDVMLFQ  300
FQNPVEPQPS PASASVANGS AGTASLINFV DEKFSISGLS AWEAAAAAAA SGWGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-17103175679Disease resistance protein RRS1
5w3x_D5e-17103175679Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812935.12e-82WRKY transcription factor 22-like
TrEMBLA0A2T7DY592e-82A0A2T7DY59_9POAL; Uncharacterized protein
STRINGPavir.Da00956.1.p1e-78(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125622536