PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00754.1.g00240.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 251aa MW: 27539.2 Da PI: 10.615

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00754.1.g00240.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.4	4.8e-16	174	220	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+k++ Le+eN++L+ +l++l Zmw_sc00754.1.g00240.1.am.mk 174 RRQKRMIKNRESAARSRARKQAYTNELENKIARLEEENERLR-KLKML 220 79****************************************.67766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.6E-14	168	216	No hit	No description
SMART	SM00338	6.8E-9	170	225	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.438	172	216	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.5E-13	174	216	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.77E-21	174	218	No hit	No description
SuperFamily	SSF57959	3.5E-11	174	216	No hit	No description
PROSITE pattern	PS00036	0	177	192	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence Send to blast
MASLGGGRSG GSPLSRQGSV YRLTLTEVES QLGEPLRSMN LDDLLRTVLP AAEPATAGKK 60 TVDEVWRDIQ SASSVRHPTM GEMTLEDFLS RAGVAVEGGA GCAGLHWLHQ HQPPQHHRHA 120 PLPRPLGVGA ATSLTVYRDA LGDGVGGFLS QVGGRKRGAA AAGVDGVVER TVERRQKRMI 180 KNRESAARSR ARKQAYTNEL ENKIARLEEE NERLRKLKML EPLEPPPEQE RRPVAELEPK 240 KQLRRTNSAR F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	176	RKRGAAAAGVDGVVERTVERRQK

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020183813.1	1e-104	ABSCISIC ACID-INSENSITIVE 5-like protein 3
Swissprot	Q9C5Q2	1e-56	AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBL	A0A1E5UQI4	1e-107	A0A1E5UQI4_9POAL; Uncharacterized protein
STRING	ONIVA07G26520.1	6e-92	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Publications ? help Back to Top
Haas BJ, et al. Full-length messenger RNA sequences greatly improve genome annotation. Genome Biol., 2002. 3(6): p. RESEARCH0029 [PMID:12093376] Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription. Plant Cell Rep., 2016. 35(1): p. 155-66 [PMID:26441053] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153]