PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00786.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 267aa    MW: 29085.7 Da    PI: 8.0893
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00786.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.11e-24116175258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDg++WrKYGqK++ gs +prsYYrC ++   gC++kk  +r+++dp++++++Y g+H++
  Zmw_sc00786.1.g00010.1.am.mk 116 DDGHSWRKYGQKPILGSIHPRSYYRCRHRhsqGCKAKKMAQRADDDPTLFDVIYYGTHTC 175
                                   7**************************988889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-26103175IPR003657WRKY domain
PROSITE profilePS5081122.114110173IPR003657WRKY domain
SuperFamilySSF1182904.18E-24112175IPR003657WRKY domain
SMARTSM007742.2E-34115177IPR003657WRKY domain
PfamPF031069.2E-25116175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MERIVHGNEG GTRLVVTELN HIKDLVRQLE THLDGPYGRC KHLTSQIFSL AERSIGLITA  60
AGLDATRKRS GVASATPSAL GDFADVPLKS TKRRVTMRKH QVRVKAAEGR EAPVDDDGHS  120
WRKYGQKPIL GSIHPRSYYR CRHRHSQGCK AKKMAQRADD DPTLFDVIYY GTHTCVDTTA  180
ATAGQVTAPA PEHDPNTGTL PRSPCGGLIV KTEGLAAATE QWNGNDNTTT PFCSTLASPV  240
SWCLSPATTS DIADEFFDID VIANFFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-19116175968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793LKSTKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651250.11e-72probable WRKY transcription factor 30
TrEMBLA0A1D8F0I23e-74A0A1D8F0I2_9POAL; WRKY74-1 protein
STRINGORUFI09G06720.15e-72(Oryza rufipogon)
STRINGOS09T0334500-015e-72(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131