PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00800.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

YABBY

Protein Properties

Length: 78aa MW: 8776.83 Da PI: 9.9196

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00800.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	38.6	3.8e-12	25	71	91	137
YABBY 91 sastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeei 137 s+s++ + ++ + +++ ++++ + r PekrqrvPsaynrfi i Zmw_sc00800.1.g00070.1.sm.mkhc 25 SSSAKFRLPMMYSAQNDLLQEQALAARAPEKRQRVPSAYNRFINGHI 71 3444555555555555555555669******************9776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04690	3.6E-10	23	71	IPR006780	YABBY protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0007275	Biological Process	multicellular organism development

Sequence ? help Back to Top
Protein Sequence Length: 78 aa Download sequence Send to blast
ENIRPQGTIN GTSRDQFDHL EFGSSSSAKF RLPMMYSAQN DLLQEQALAA RAPEKRQRVP 60 SAYNRFINGH IIQTSILG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002442565.1	3e-24	protein YABBY 6
TrEMBL	C5YSF3	7e-23	C5YSF3_SORBI; Uncharacterized protein
STRING	Sb08g022030.1	1e-23	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1394	37	121