PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00816.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 241aa    MW: 25663.8 Da    PI: 8.4878
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00816.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19114164155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GVr+++ +g+W+AeIrdp+    r +r +lg+f+tae Aa+a++ a+ +++g
  Zmw_sc00816.1.g00120.1.sm.mk 114 SKYRGVRRRP-WGKWAAEIRDPY----RaARKWLGTFDTAEAAARAYDVAAVEFKG 164
                                   89********.**********74....57**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.63E-19114172No hitNo description
PfamPF008472.3E-12114163IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-22114173IPR016177DNA-binding domain
SMARTSM003802.4E-33115178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-30115173IPR001471AP2/ERF domain
PROSITE profilePS5103225.488115172IPR001471AP2/ERF domain
PRINTSPR003674.7E-11116127IPR001471AP2/ERF domain
PRINTSPR003674.7E-11138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MAPRLGRGGF MLRNAEQEDS LFVSALISVM SGDTTAPTLD VAETKPDVAA APAVYCARCG  60
ADGCPGRCEF FGAADQAAAT ISSSSDSEEH EGESTSRVVT GGAGKRIRRR RRVSKYRGVR  120
RRPWGKWAAE IRDPYRAARK WLGTFDTAEA AARAYDVAAV EFKGPHAKLN FPAAAPAATA  180
SSSASAQALP PPQNLHEKCG SNAASPMHMA REPAGAPVAK DPEIWDGLNE IMNDGSFWRM  240
P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-191151721472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107122RRRRRVSKYRGVRRRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025806850.12e-79ethylene-responsive transcription factor ERF109-like
TrEMBLA0A2T7FCK76e-80A0A2T7FCK7_9POAL; Uncharacterized protein
STRINGOS02T0764700-019e-78(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124