PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00818.1.g00220.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 396aa    MW: 41797.2 Da    PI: 6.5201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00818.1.g00220.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17e-16159208355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+++e Aa a+++a+ + +g
  Zmw_sc00818.1.g00220.1.am.mk 159 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAALAYDQAAFSVRG 208
                                   67******.**********32..2.24**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.588158216IPR001471AP2/ERF domain
SMARTSM003808.8E-32158222IPR001471AP2/ERF domain
CDDcd000181.48E-15159218No hitNo description
Gene3DG3DSA:3.30.730.102.8E-27159216IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-20159217IPR016177DNA-binding domain
PRINTSPR003671.4E-7159170IPR001471AP2/ERF domain
PfamPF008471.0E-11160208IPR001471AP2/ERF domain
PRINTSPR003671.4E-7182198IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MLVTAMVMAD RSRARSATAI KPARGRRAGQ PSASLCSAFR QQPYTPASRN ELACLNDPFY  60
SMDPYASSCM FSHPCTGEIS GLVESTAGGL DGGGDMQRLL DALMHDGHSE GSFDDDSASA  120
SCSEESSSSA GNGNSNSSTG VHDKEETKQQ QRSNDKQPFI GVRKRPWGKF AAEIRDSTRK  180
GARVWLGTFD SPEAAALAYD QAAFSVRGAA AVLNFPVDRV QDSLRALALS SSTSAGAGSP  240
VLALKSRHSL RKRSPNKNKT RPRSEAASVA PQQQQPCTGG GGVVELEDLG ADYLDELLRV  300
SSPTSGGSQG SRGGHQASCP RSESPAKYLE EEEKLAVKRA ELSRQLRDAA ADLFVVSQKI  360
APEEDEAAMA DMADAIRGNK DASLKSDVAG GSSIAF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-231592161572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001130815.19e-63uncharacterized protein LOC100191919
TrEMBLB4FAN62e-61B4FAN6_MAIZE; Ethylene-responsive transcription factor 1B
TrEMBLK4JRR92e-61K4JRR9_MAIZE; AP2-EREBP-type transcription factor (Fragment)
STRINGGRMZM2G123119_P014e-62(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249