PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00846.1.g00230.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 239aa MW: 25078.4 Da PI: 9.9044

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00846.1.g00230.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.4	1.5e-08	151	193	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+ eN+aL++e++ l+k + +l +e+ Zmw_sc00846.1.g00230.1.sm.mkhc 151 RPRKKMRLPEIQQMVRSLSVENDALRQEMKALQKACTALSKEN 193 89*************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-5	151	190	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MTAAVDVEPC ALVATAADII CSFRASDLAG WTPPWRKRPD PPALDDDAAD AXXXXSCSPS 60 ASAGSGSAGA RKTKKKEARR ARGSPPSPLD YSAGSGASTS GGEDGAFCSP PPPVLSSIGG 120 VLQVDPVNSK VGLAGRRSIP PVPPPRPTGQ RPRKKMRLPE IQQMVRSLSV ENDALRQEMK 180 ALQKACTALS KENGKLETRL HQLNKRQEKK GKLQAGQGAT EEAQNGFALP DLNLPAHDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	156	RPRKKMR
2	204	211	KRQEKKGK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025811831.1	2e-68	collagen alpha-1(I) chain-like
TrEMBL	A0A3L6PC00	1e-68	A0A3L6PC00_PANMI; Uncharacterized protein
STRING	GRMZM2G050912_P01	6e-58	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51