PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00882.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 146aa    MW: 15942.3 Da    PI: 9.1412
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00882.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.61.3e-131201452651
                         G2-like  26 kAtPktilelmkvkgLtlehvkSHLQ 51 
                                     kAtPk+i ++mkvkgLt++hvkSHLQ
  Zmw_sc00882.1.g00150.1.sm.mkhc 120 KATPKAIQRVMKVKGLTIYHVKSHLQ 145
                                     8************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF111076.3E-1411103No hitNo description
TIGRFAMsTIGR015571.3E-9119146IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.3E-11119145IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MGWAHATVAL EELLGLVRGF VDILVLAGGR TSSGAAATWS CGEVKNALRW ALFFEEVFKN  60
LRDSGQYEDS ASELDAALVE LTSSQDFPKG LAGMRSDTLS SARDIDARKF NTSKLFLLPK  120
ATPKAIQRVM KVKGLTIYHV KSHLQV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954345.17e-54uncharacterized protein LOC101763564 isoform X3
TrEMBLA0A1E5V0193e-54A0A1E5V019_9POAL; Uncharacterized protein
STRINGPavir.Ab03274.1.p4e-53(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54942526