PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00900.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 323aa MW: 32199.8 Da PI: 8.0496

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00900.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.6	6.5e-39	24	83	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s+ Zmw_sc00900.1.g00030.1.sm.mkhc 24 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRSR 83 57899****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-30	21	80	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.4E-33	26	81	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.385	27	81	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	29	65	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0048364	Biological Process	root development
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MAGAGGAGKS GTSAAGAPVV DPRAEALRCP RCDSANTKFC YYNNYSLSQP RHFCKACKRY 60 WTRGGTLRNV PVGGGCRKNK RSRTSAASAA GRTVSSAAAA GATSSSAASA LSLPPPAGVS 120 SSMQSLTSAL GLSGGTSLAS LLLGGGSGAD HLGLFQAAMQ SVVSDTTAYE MQQQTQTQVD 180 HLLGLGGYGS GAAGAQIQLK PWIQDSGAGA GGIMDTFYAP LLSGSVVPGL EELHVKAEAA 240 GAGEHQQAKV DAGAGDQNSW ELPTPSSTSN IIASDALMAA AAASMTNNPA PSSFMYWGNG 300 GIGGAAASWP DLANCGSSIA TLF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803596.1	1e-128	dof zinc finger protein 2-like
TrEMBL	A0A2T7EWI5	1e-127	A0A2T7EWI5_9POAL; Uncharacterized protein
STRING	Sb02g034320.1	1e-119	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41