PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00909.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 252aa    MW: 26601.6 Da    PI: 6.5059
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00909.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like53.45.5e-17871192355
                       G2-like  23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   G++ AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Zmw_sc00909.1.g00020.1.sm.mk  87 GHQGATPKSVLELMDVKDLTLAHVKSHLQMYRT 119
                                   9999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.2E-687120IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-1587120IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-1189119IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEFFPSQPDL SLQIGLPTSA PPHDHHHHHH AAAALNARFF AAGGGAGNGG LVGSAGTMAP  60
SSLQLPGAMP MPLPLPLPVP MHPGAAGHQG ATPKSVLELM DVKDLTLAHV KSHLQMYRTV  120
KNTERPAASS DQADGFEKGA AGEICDDNSL DLQGAYSGGG GRPETAARHG SYSSLSFVSF  180
DVIRREDWTG FPSESSTGSI HSLKDRQMQS KSLEILSDMN SSCVSETTTS STSVDLNLDF  240
TLGRPHQTRR PN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821359.12e-70probable transcription factor RL9 isoform X1
TrEMBLA0A3L6PS851e-69A0A3L6PS85_PANMI; Putative transcription factor RL9 isoform X1
STRINGOB08G13890.11e-67(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665