PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00911.1.g00240.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 331aa    MW: 36646.4 Da    PI: 8.6944
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00911.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247e-082572981454
                                   HHHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS
                           HLH  14 driNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54 
                                   d+iN+ +++L++llP++s + ++ + s +  L++++ YIksL
  Zmw_sc00911.1.g00240.1.am.mk 257 DEINELISKLQDLLPESSrRRNASRSSASKLLKETCSYIKSL 298
                                   68**************6647777889***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.737243298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-8257314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-8257317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-5257298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MVGPRTARYL LAPQWSHSHL PSRTAGRRVT CDGPVSPDDT PRQEVGGESG WRPRLVPRRS  60
CHACFSGTQL SSERKQVARR HQRCAHVAVP AANLAISGIM AQSFDERAPP VDGWISQNRP  120
RRDTSPYLSL FLCASSASVW RFAALLCPCM CDCGSSSLLV VVPGSEAGRP ALSTVNPVPL  180
HTDNPRVQKA SCMVHAWLEQ GRPDAGQKAD DRSRHEDAFP SASGPSEAAE KATKLECWFQ  240
HRRIETMSGR RGRISDDEIN ELISKLQDLL PESSRRRNAS RSSASKLLKE TCSYIKSLHR  300
EVDDLSDRLS ELMSTMDNDS PQAEIIRSLL R