PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00919.1.g00290.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 257aa    MW: 28601.8 Da    PI: 5.0235
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00919.1.g00290.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM621.8e-19121422127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknr 76 
                                   ppG+ F+Ptdeel+ +yL ++  gk+  ++ v +++ +  +++Pw+L +    ++  +++   +f+++ ++     +r++r
  Zmw_sc00919.1.g00290.1.am.mk  12 PPGLIFDPTDEELIEHYLLPRSLGKPEAFSVViVEDNKAANTQPWKLFQnhdlMALIDDHlPAFFYVRDERP--DARRSRR 90 
                                   8*************************777666356669*********6334542222444355777777664..5679999 PP

                           NAM  77 atksgyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                       g Wk + +    d++vl   ++++ ++++ L ++  +     +  Wvmhe+ 
  Zmw_sc00919.1.g00290.1.am.mk  91 CEGGGWWKIQKSeskdDRHVLIVgGRKVRWTRNNLNLHLDSG----SVGWVMHEFF 142
                                   999999*966542333566666556777899*******5443....568*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-2310148IPR003441NAC domain
PROSITE profilePS5100522.96311174IPR003441NAC domain
PfamPF023651.2E-1412141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MSPAKCLGDD HPPGLIFDPT DEELIEHYLL PRSLGKPEAF SVVIVEDNKA ANTQPWKLFQ  60
NHDLMALIDD HLPAFFYVRD ERPDARRSRR CEGGGWWKIQ KSESKDDRHV LIVGGRKVRW  120
TRNNLNLHLD SGSVGWVMHE FFIDDHPLLK PDGHAHDDAS LGGEQPVTQR LRVTAAAGSS  180
SADSTTTTTS LDQNLGTAHA SEDQEHPSAS AMPMPIHNSR ADLDPVNIIY DGEFQALLAT  240
ADAAMAPFRV LFNHDEE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946