PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00926.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 102aa MW: 11035.6 Da PI: 8.2576

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00926.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.1	3.1e-08	62	92	3	35
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TT CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askaps 35 r+h e+E+rRR+ri+s +++Lr +l + ++ Zmw_sc00926.1.g00010.1.am.mk 62 RNHREAEKRRRERIKSHLDRLRNVLACdP---KA 92 78**********************98844...44 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.35	59	102	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.22E-6	60	96	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-5	62	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-5	63	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MFPAEVSALP LQGDGGVVPL LPPFFMGSIW QADAGGSASA SEEDEAAAAA AAAHDRALAA 60 SRNHREAEKR RRERIKSHLD RLRNVLACDP KAIKLYKHFL IC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020175056.1	3e-17	transcription factor bHLH106-like
TrEMBL	A0A453M7M5	4e-19	A0A453M7M5_AEGTS; Uncharacterized protein
STRING	Traes_5BL_CBFAD4B59.1	1e-15	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9578	30	39