PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00936.1.g00210.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 250aa    MW: 27119.7 Da    PI: 11.7248
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00936.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.4e-0844751748
                                  HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +++G g+W++     g+ R++k+c++rw ++l
  Zmw_sc00936.1.g00210.1.am.mk 44 AEHGEGNWNRLRDNAGLDRCGKSCRLRWTNHL 75
                                  68***************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001675.00E-54475No hitNo description
SuperFamilySSF466894.72E-1544104IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.5E-104477IPR009057Homeodomain-like
PfamPF002492.3E-64475IPR001005SANT/Myb domain
PROSITE profilePS500906.5164575IPR017877Myb-like domain
PROSITE profilePS500905.12276107IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.4E-1078108IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MKQHNRTSIR GLASSGGRLV AGRTSGAARE QSGGVGYQRL SEAAEHGEGN WNRLRDNAGL  60
DRCGKSCRLR WTNHLKPGLR KGPFDKEEVD KILRMHKKWG NKWASMAMRQ FLQPASTFPS  120
GINGFCSFRD LIHGLICYRD PATVRKRHTC WAAPSARRTA TGRRDAITGR QTGARRSRTI  180
SRAAVSVAAH VIGYPVGRSR STDLLSASAA RRSHLGHESG PPGTGSILTD AAPASTEPKG  240
KEKAVLDSNA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4608633