PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00947.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 220aa    MW: 24691 Da    PI: 12.1892
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00947.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.31.6e-07175204138
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 
                                   ++ykGVr+++ +g+Wv+eIr       ++r+s g +g+
  Zmw_sc00947.1.g00100.1.am.mk 175 CRYKGVRRRR-WGKWVSEIRR------QRRYSFG-YGY 204
                                   78*****777.*********9......7888866.665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.888176220IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-7176196IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MPTLRPRTPT VDSLESQRTR TSTRIRFPPT RLDPLAGVCV SACASTRTTT VTVVGPLRPA  60
APIHTQKRAS RSQIHLFASV ATGQNDRTFQ TGRWLTTRLL AGIGSFDHDG GRAQDPWSAP  120
LAALTSPFRQ TRTPPSQARR LEVEPTERAW GLGTRAGHRR REACATMSGG ADRRCRYKGV  180
RRRRWGKWVS EIRRQRRYSF GYGYELGHGA ALGREQELQR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2440734