PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00950.1.g00290.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 626aa MW: 65285 Da PI: 10.4308

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00950.1.g00290.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.6	6.7e-39	397	456	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +alkcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+ss Zmw_sc00950.1.g00290.1.am.mk 397 PEALKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKAKRSS 456 5789****************************************************9976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	388	449	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.2E-33	399	454	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	400	454	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	402	438	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence Send to blast
MRRHSSDHRS KGDQDLSTTP HVNAVQDNPA EFATAASRTP NTRKEEVAVF CRAMVRSACQ 60 SAAEHGRDRS NGTFAAGMYP AWRCGTVWRD ADDRAFAGAA RPAQGSAARL GERARPLFNG 120 NGLQRAVANA RTPVTACAPA ARTPSANGRP ARDPPTGRPV ARLFACADGQ GLSVGHGRVR 180 RAKAIAPALI WAMRRAGGRA YVEPGLSTYR ATAVYACASP PASATCRARA TTSPTAGCRN 240 RPAGLPGGVV VVIVIGRCTA DVVAARGRHT TAAGSDRSTA LARLDSFVKN VRQHTAIDSL 300 PAFGNGEAEV AGSTSPSRKK AEAVDGNERG DAERVELSSC RAPSQRLRLL PRAMQEFQSI 360 PGLAGRLFGG AGASDLYRAH QAQQGPGARC GGVSPAPEAL KCPRCESTNT KFCYYNNYNL 420 SQPRHFCKSC RRYWTKGGVL RNVPVGGGCR KAKRSSASAA SSTPSTPTST EAKNPRRAPA 480 PSPRRTSSGR SSPTGLAAAA APVTPSSSNN IAVTGHSSAN PFSTVDVAPP APIFADQAAA 540 LASLFAPPPP PQLPVFSFTA QSNKDEAALV AGQAARPDDE AASDMAPFTS LDAGIFEQLG 600 DASAAAAYWN AGSCWTDVQD PSMYLP

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence Send to blast

MRRHSSDHRS KGDQDLSTTP HVNAVQDNPA EFATAASRTP NTRKEEVAVF CRAMVRSACQ  60
SAAEHGRDRS NGTFAAGMYP AWRCGTVWRD ADDRAFAGAA RPAQGSAARL GERARPLFNG  120
NGLQRAVANA RTPVTACAPA ARTPSANGRP ARDPPTGRPV ARLFACADGQ GLSVGHGRVR  180
RAKAIAPALI WAMRRAGGRA YVEPGLSTYR ATAVYACASP PASATCRARA TTSPTAGCRN  240
RPAGLPGGVV VVIVIGRCTA DVVAARGRHT TAAGSDRSTA LARLDSFVKN VRQHTAIDSL  300
PAFGNGEAEV AGSTSPSRKK AEAVDGNERG DAERVELSSC RAPSQRLRLL PRAMQEFQSI  360
PGLAGRLFGG AGASDLYRAH QAQQGPGARC GGVSPAPEAL KCPRCESTNT KFCYYNNYNL  420
SQPRHFCKSC RRYWTKGGVL RNVPVGGGCR KAKRSSASAA SSTPSTPTST EAKNPRRAPA  480
PSPRRTSSGR SSPTGLAAAA APVTPSSSNN IAVTGHSSAN PFSTVDVAPP APIFADQAAA  540
LASLFAPPPP PQLPVFSFTA QSNKDEAALV AGQAARPDDE AASDMAPFTS LDAGIFEQLG  600
DASAAAAYWN AGSCWTDVQD PSMYLP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6496	30	50