PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00956.1.g00190.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 870aa MW: 95380.9 Da PI: 9.3607

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00956.1.g00190.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.5	3.9e-10	127	150	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 pr+rWt+ LH++Fv+ave LGG+e Zmw_sc00956.1.g00190.1.am.mk 127 PRMRWTTALHAHFVHAVELLGGHE 150 8*********************97 PP
2	NAM	175.2	1.8e-54	567	692	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelv++yL++kv++ + + ++i++vd++k+ePw+Lp+k++ +ekewyfFs rd+ky+tg r+nrat+sg Zmw_sc00956.1.g00190.1.am.mk 567 LPPGFRFHPTDEELVTYYLTHKVSDFAFAT-RAIADVDLNKCEPWELPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSG 646 79***********************999.88***********999999*********************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWk+tgkdke+++ g lvg+kktLvfy+grapkg kt+Wvmheyrl Zmw_sc00956.1.g00190.1.am.mk 647 YWKTTGKDKEIFH-CGMLVGMKKTLVFYRGRAPKGGKTSWVMHEYRL 692 *********.99***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-7	124	151	IPR009057	Homeodomain-like
SuperFamily	SSF101941	6.28E-63	561	713	IPR003441	NAC domain
PROSITE profile	PS51005	59.423	567	713	IPR003441	NAC domain
Pfam	PF02365	3.5E-28	568	692	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence Send to blast
MPFLTHAHKL ASYKNRMSYG THDLITKIPS YSISLNKNKL NSLLLRGEPC HETGLNDEPN 60 LCLGLDSTAT DMAHQDTVHC DIQQKRLHQP DQIQRFKKSS SGSQTLSGGA VRSGNGSGGG 120 KRSSRAPRMR WTTALHAHFV HAVELLGGHE SHAEMRDMGF LRRGCEVYGF DAFNYHTSNP 180 TVSARRSRDR AIYHCCAQGR GRVSNDSALL LATEIIMCGK THQSSSSALA GRPLKYTAVL 240 VLPRWWRFGS ASGTTTATMT PGGAVREAPS WCARPPFSQQ APLPLPCPYL MSSHRSRYLL 300 AQNHQIQGWK RGPPAQHGTA AHSAGHVETG NSITRPPSWS YSGIASRWSC PTMATTKGSG 360 GAEEQAAQRM KQQVSSSSSM PSLEISLGRQ GWQQDQPQPQ QRGKELTLLK CLVKLGHNVH 420 ECCEDLRMLP SSGRSELSIG SPLTGFWSNN EDSATRRWME LAGNPSLHRG VNVKRRIDAS 480 SSILSTSPSP SPVTLAVVFG PRLVRPREPA LEDEEDRPEG GRTCGEGRIN SVCSSATIYA 540 PLPERLSPPL PRAGRALRPR VVMEEGLPPG FRFHPTDEEL VTYYLTHKVS DFAFATRAIA 600 DVDLNKCEPW ELPSKASMGE KEWYFFSMRD RKYPTGIRTN RATDSGYWKT TGKDKEIFHC 660 GMLVGMKKTL VFYRGRAPKG GKTSWVMHEY RLQNKFPYKP NKEEWVVCRV FKKCQIIKVR 720 PPTDSPTMDS PYHDGNASLG ELDVSSILSN LTPASVHTSS SAPGEGFGHR VDMNAYMSWM 780 AAANQGAAAA AMIPWAMAPG LLGNVFAAPN QPYAGCSPSQ PREIGGVVAN VGGGQAMFGS 840 SVAKVDMECD QQHQPPPQQL GIDDSTWGAF

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence Send to blast

MPFLTHAHKL ASYKNRMSYG THDLITKIPS YSISLNKNKL NSLLLRGEPC HETGLNDEPN  60
LCLGLDSTAT DMAHQDTVHC DIQQKRLHQP DQIQRFKKSS SGSQTLSGGA VRSGNGSGGG  120
KRSSRAPRMR WTTALHAHFV HAVELLGGHE SHAEMRDMGF LRRGCEVYGF DAFNYHTSNP  180
TVSARRSRDR AIYHCCAQGR GRVSNDSALL LATEIIMCGK THQSSSSALA GRPLKYTAVL  240
VLPRWWRFGS ASGTTTATMT PGGAVREAPS WCARPPFSQQ APLPLPCPYL MSSHRSRYLL  300
AQNHQIQGWK RGPPAQHGTA AHSAGHVETG NSITRPPSWS YSGIASRWSC PTMATTKGSG  360
GAEEQAAQRM KQQVSSSSSM PSLEISLGRQ GWQQDQPQPQ QRGKELTLLK CLVKLGHNVH  420
ECCEDLRMLP SSGRSELSIG SPLTGFWSNN EDSATRRWME LAGNPSLHRG VNVKRRIDAS  480
SSILSTSPSP SPVTLAVVFG PRLVRPREPA LEDEEDRPEG GRTCGEGRIN SVCSSATIYA  540
PLPERLSPPL PRAGRALRPR VVMEEGLPPG FRFHPTDEEL VTYYLTHKVS DFAFATRAIA  600
DVDLNKCEPW ELPSKASMGE KEWYFFSMRD RKYPTGIRTN RATDSGYWKT TGKDKEIFHC  660
GMLVGMKKTL VFYRGRAPKG GKTSWVMHEY RLQNKFPYKP NKEEWVVCRV FKKCQIIKVR  720
PPTDSPTMDS PYHDGNASLG ELDVSSILSN LTPASVHTSS SAPGEGFGHR VDMNAYMSWM  780
AAANQGAAAA AMIPWAMAPG LLGNVFAAPN QPYAGCSPSQ PREIGGVVAN VGGGQAMFGS  840
SVAKVDMECD QQHQPPPQQL GIDDSTWGAF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	9e-53	567	713	20	168	NAC domain-containing protein 19
3swm_B	9e-53	567	713	20	168	NAC domain-containing protein 19
3swm_C	9e-53	567	713	20	168	NAC domain-containing protein 19
3swm_D	9e-53	567	713	20	168	NAC domain-containing protein 19
3swp_A	9e-53	567	713	20	168	NAC domain-containing protein 19
3swp_B	9e-53	567	713	20	168	NAC domain-containing protein 19
3swp_C	9e-53	567	713	20	168	NAC domain-containing protein 19
3swp_D	9e-53	567	713	20	168	NAC domain-containing protein 19

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7919	34	50