PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00983.1.g00240.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 265aa    MW: 28218.6 Da    PI: 6.9176
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00983.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-15122164347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    ++ eE+ellv+++++lG++ W +Ia +++ gRt+k++ s+w++ 
  Zmw_sc00983.1.g00240.1.am.mk 122 CFSDEEEELLVKLHALLGNR-WLLIAGRLP-GRTGKEVESHWNST 164
                                   699*****************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.904113169IPR017930Myb domain
SMARTSM007179.8E-13119167IPR001005SANT/Myb domain
SuperFamilySSF466892.18E-11121169IPR009057Homeodomain-like
PfamPF002492.5E-13122163IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-16123166IPR009057Homeodomain-like
CDDcd001676.65E-11123162No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MVFPAEPSAG RLLVPILSAQ AIRWKRNQRL ASRVLALAAR GVNAPDLAAQ PQAGTGGRPT  60
DRSSSRAPAQ TGDEEEATPA PVWGRRQAGV AAATAAGRGT LGSYSIVAGA GVDSAYSGGS  120
KCFSDEEEEL LVKLHALLGN RWLLIAGRLP GRTGKEVESH WNSTMRRKLE CVAVVHHDSH  180
RSMTRLAPAD GEQQRRDPCD QLHLGEVECK AKHPNCCLSS NDDDSVSDAG SYCGARQELA  240
CGVNLELTLA TPCFYVGENE KVADH
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2780155