PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00991.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 445aa    MW: 48563.3 Da    PI: 11.3133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00991.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.5e-063714121454
                                   HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                           HLH  14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                   d+i + +++L+ llP+ + ++++ + s a +L+ ++ YI+sL
  Zmw_sc00991.1.g00090.1.am.mk 371 DQISELLSKLQALLPEsQARNGAHRGSAARVLQDTCSYIRSL 412
                                   6899************666888888***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.369357412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-6371429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-7371416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0009826Biological Processunidimensional cell growth
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MEIDVDRQFG HCMPQQRRDD RGINATGHGR VVPPTDKRCL GTVGCRAADR VRRATRDEGG  60
RRSKHYQPVR ARALRICRCF RFVSRMSYSA HAAAASVSRR APTCGASWLS RHRPNPANHA  120
HSNSRGQNAS KPIDVTSNRA CMENTQDKAT EILQSGTRTD LRVPRAYPVE GARLINAMRS  180
ARSPGRRTAH MVGAGGTPWP AFASPGARSA ISLVAGAIEF VRNESTKPIR SSRMCRGACV  240
CVVRQRADDA LWPLLLLEMG SDRQMPSIRS NQQSGGLARC VVQSIQGWFV VGLCLDRAGD  300
RPSCAMLGCS GLWPRSLCLV PSRGRVNYSC MQAARGLERI IASCMSSSRR SRPRRAGSSL  360
SSSSSRTISE DQISELLSKL QALLPESQAR NGAHRGSAAR VLQDTCSYIR SLHQEVDNLS  420
ETLAELLSSA DVTSDQAAVI RSLLM
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4253822