PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01035.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 407aa MW: 45067.4 Da PI: 8.1868

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01035.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.2	1.4e-14	177	220	6	50
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 +FhPtdeel+ +yLk+k+++k+l++ e i+++diyk++PwdLp++ Zmw_sc01035.1.g00080.1.am.mk 177 QFHPTDEELIGFYLKRKIQHKSLPI-ELIRQLDIYKYDPWDLPMS 220 7**********************.89************953 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.23E-13	177	218	IPR003441	NAC domain
Pfam	PF02365	1.0E-4	177	215	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
MIERSPHARL SIDVPKIFPP LSRLANQALP IDAMRPCTRT DRQLPRPVRV GQVLCCLRNT 60 TEVHGLCSEL SKLWSPAGMM RFDQAESETS IVFPRLASFP ADANWSAASV FPWSWSWSRC 120 PMPHVHGRNA DVRGTAHHAV SCRPHEWVWH GPIEVKQARD KPQTDIPFED GCGATRQFHP 180 TDEELIGFYL KRKIQHKSLP IELIRQLDIY KYDPWDLPMS IIDSSSSRPA ASTALPPSGA 240 DHQNMSVLSA IPLDLPAGMD ITSMVLNVTP TSLQNVSRIP TNIEFGQPQH CNSNSSSSLV 300 TRCTVDLPDV GSGINGAQRS INFPFNMQGA LPDDWRMTFP AHGPVVLQGI ASRGAANPSR 360 DLCTTTARRV FAGLAQWCEK QFLWCISPNG WSARPARAST LVSWTIG

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

MIERSPHARL SIDVPKIFPP LSRLANQALP IDAMRPCTRT DRQLPRPVRV GQVLCCLRNT  60
TEVHGLCSEL SKLWSPAGMM RFDQAESETS IVFPRLASFP ADANWSAASV FPWSWSWSRC  120
PMPHVHGRNA DVRGTAHHAV SCRPHEWVWH GPIEVKQARD KPQTDIPFED GCGATRQFHP  180
TDEELIGFYL KRKIQHKSLP IELIRQLDIY KYDPWDLPMS IIDSSSSRPA ASTALPPSGA  240
DHQNMSVLSA IPLDLPAGMD ITSMVLNVTP TSLQNVSRIP TNIEFGQPQH CNSNSSSSLV  300
TRCTVDLPDV GSGINGAQRS INFPFNMQGA LPDDWRMTFP AHGPVVLQGI ASRGAANPSR  360
DLCTTTARRV FAGLAQWCEK QFLWCISPNG WSARPARAST LVSWTIG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP33067	2	2